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Marco Marra
This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers
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42
Jones, Steven
15
Holt, Robert
12
Schein, Jacqueline
11
Hirst, Martin
10
Khattra, Jaswinder
9
Moerman, Donald
9
Hillier, LaDeana
9
Baillie, David
9
Smailus, Duane
7
Stott, Jeff
7
Waterston, Robert
7
Delaney, Allen
7
Butterfield, Yaron
7
Krzywinski, Martin
6
Shin, Heesun
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All Publications
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2009: Lehman Anna M; Friedman Jan M; Chai David; Zahir Farah R; Marra Marco A; Prisman Larraine; Tsang Erica; Eydoux Patrice; Armstrong Linlea
A characteristic syndrome associated with microduplication of 8q12, inclusive of CHD7.
European journal of medical genetics 2009;52(6):436-9.
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2009: Shah Sohrab P; Morin Ryan D; Khattra Jaswinder; Prentice Leah; Pugh Trevor; Burleigh Angela; Delaney Allen; Gelmon Karen; Guliany Ryan; Senz Janine; Steidl Christian; Holt Robert A; Jones Steven; Sun Mark; Leung Gillian; Moore Richard; Severson Tesa; Taylor Greg A; Teschendorff Andrew E; Tse Kane; Turashvili Gulisa; Varhol Richard; Warren René L; Watson Peter; Zhao Yongjun; Caldas Carlos; Huntsman David; Hirst Martin; Marra Marco A; Aparicio Samuel
Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution.
Nature 2009;461(7265):809-13.
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2009: Meissner Barbara; Warner Adam; Wong Kim; Dube Nicholas; Lorch Adam; McKay Sheldon J; Khattra Jaswinder; Rogalski Teresa; Somasiri Aruna; Chaudhry Iasha; Fox Rebecca M; Miller David M; Baillie David L; Holt Robert A; Jones Steven J M; Marra Marco A; Moerman Donald G
An integrated strategy to study muscle development and myofilament structure in Caenorhabditis elegans.
PLoS genetics 2009;5(6):e1000537.
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2009: Zahir Farah R; Langlois Sylvie; Gall Kim; Eydoux Patrice; Marra Marco A; Friedman Jan M
A novel de novo 1.1 Mb duplication of 17q21.33 associated with cognitive impairment and other anomalies.
American journal of medical genetics. Part A 2009;149A(6):1257-62.
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2009: McGhee James D; Fukushige Tetsunari; Krause Michael W; Minnema Stephanie E; Goszczynski Barbara; Gaudet Jeb; Kohara Yuji; Bossinger Olaf; Zhao Yongjun; Khattra Jaswinder; Hirst Martin; Jones Steven J M; Marra Marco A; Ruzanov Peter; Warner Adam; Zapf Richard; Moerman Donald G; Kalb John M
ELT-2 is the predominant transcription factor controlling differentiation and function of the C. elegans intestine, from embryo to adult.
Developmental biology 2009;327(2):551-65.
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2009: Hirst Martin; Marra Marco A
Epigenetics and human disease.
The international journal of biochemistry & cell biology 2009;41(1):136-46.
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2009: Romanuik Tammy L; Wang Gang; Holt Robert A; Jones Steven J M; Marra Marco A; Sadar Marianne D
Identification of novel androgen-responsive genes by sequencing of LongSAGE libraries.
BMC genomics 2009;10():476.
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2009: Diguistini Scott; Liao Nancy Y; Platt Darren; Robertson Gordon; Seidel Michael; Chan Simon K; Docking T Roderick; Birol Inanc; Holt Robert A; Hirst Martin; Mardis Elaine; Marra Marco A; Hamelin Richard C; Bohlmann Jörg; Breuil Colette; Jones Steven Jm
De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data.
Genome biology 2009;10(9):R94.
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2009: Halaschek-Wiener Julius; Amirabbasi-Beik Mahsa; Monfared Nasim; Pieczyk Markus; Sailer Christian; Kollar Anita; Thomas Ruth; Agalaridis Georgios; Yamada So; Oliveira Lisa; Collins Jennifer A; Meneilly Graydon; Marra Marco A; Madden Kenneth M; Le Nhu D; Connors Joseph M; Brooks-Wilson Angela R
Genetic variation in healthy oldest-old.
PloS one 2009;4(8):e6641.
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2009: Wang Xin; Zhao Yongjun; Wong Kim; Ehlers Peter; Kohara Yuji; Jones Steven J; Marra Marco A; Holt Robert A; Moerman Donald G; Hansen Dave
Identification of genes expressed in the hermaphrodite germ line of C. elegans using SAGE.
BMC genomics 2009;10():213.
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2008: Delaney Allen D; Qian Hong; Friedman Jan M; Marra Marco A
Use of Affymetrix mapping arrays in the diagnosis of gene copy number variation.
Current protocols in human genetics / editorial board, Jonathan L. Haines ... [et al.] 2008;Chapter 8():Unit 8.13.
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2008: Pugh T J; Delaney A D; Farnoud N; Flibotte S; Griffith M; Li H I; Qian H; Farinha P; Gascoyne R D; Marra M A
Impact of whole genome amplification on analysis of copy number variants.
Nucleic acids research 2008;36(13):e80.
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2008: Morin Ryan D; O'Connor Michael D; Griffith Malachi; Kuchenbauer Florian; Delaney Allen; Prabhu Anna-Liisa; Zhao Yongjun; McDonald Helen; Zeng Thomas; Hirst Martin; Eaves Connie J; Marra Marco A
Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells.
Genome research 2008;18(4):610-21.
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2008: Griffith Malachi; Tang Michelle J; Griffith Obi L; Morin Ryan D; Chan Susanna Y; Asano Jennifer K; Zeng Thomas; Flibotte Stephane; Ally Adrian; Baross Agnes; Hirst Martin; Jones Steven J M; Morin Gregg B; Tai Isabella T; Marra Marco A
ALEXA: a microarray design platform for alternative expression analysis.
Nature methods 2008;5(2):118.
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2008: Ralph Steven G; Chun Hye Jung E; Kolosova Natalia; Cooper Dawn; Oddy Claire; Ritland Carol E; Kirkpatrick Robert; Moore Richard; Barber Sarah; Holt Robert A; Jones Steven J M; Marra Marco A; Douglas Carl J; Ritland Kermit; Bohlmann Jörg
A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis).
BMC genomics 2008;9():484.
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2008: Morozova Olena; Morozov Vyacheslav; Hoffman Brad G; Helgason Cheryl D; Marra Marco A
A seriation approach for visualization-driven discovery of co-expression patterns in Serial Analysis of Gene Expression (SAGE) data.
PloS one 2008;3(9):e3205.
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2008: D'Souza Cletus A; Chopra Vikramjit; Varhol Richard; Xie Yuan-Yun; Bohacec Slavita; Zhao Yongjun; Lee Lisa L C; Bilenky Mikhail; Portales-Casamar Elodie; He An; Wasserman Wyeth W; Goldowitz Daniel; Marra Marco A; Holt Robert A; Simpson Elizabeth M; Jones Steven J M
Identification of a set of genes showing regionally enriched expression in the mouse brain.
BMC neuroscience 2008;9():66.
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2008: Shin Heesun; Hirst Martin; Bainbridge Matthew N; Magrini Vincent; Mardis Elaine; Moerman Donald G; Marra Marco A; Baillie David L; Jones Steven J M
Transcriptome analysis for Caenorhabditis elegans based on novel expressed sequence tags.
BMC biology 2008;6():30.
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2008: Ralph Steven G; Chun Hye Jung E; Cooper Dawn; Kirkpatrick Robert; Kolosova Natalia; Gunter Lee; Tuskan Gerald A; Douglas Carl J; Holt Robert A; Jones Steven J M; Marra Marco A; Bohlmann Jörg
Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding.
BMC genomics 2008;9():57.
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2007: Huang Peiming; Pleasance Erin D; Maydan Jason S; Hunt-Newbury Rebecca; O'Neil Nigel J; Mah Allan; Baillie David L; Marra Marco A; Moerman Donald G; Jones Steven J M
Identification and analysis of internal promoters in Caenorhabditis elegans operons.
Genome research 2007;17(10):1478-85.
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2007: Hunt-Newbury Rebecca; Viveiros Ryan; Johnsen Robert; Mah Allan; Anastas Dina; Fang Lily; Halfnight Erin; Lee David; Lin John; Lorch Adam; McKay Sheldon; Okada H Mark; Pan Jie; Schulz Ana K; Tu Domena; Wong Kim; Zhao Z; Alexeyenko Andrey; Burglin Thomas; Sonnhammer Eric; Schnabel Ralf; Jones Steven J; Marra Marco A; Baillie David L; Moerman Donald G
High-throughput in vivo analysis of gene expression in Caenorhabditis elegans.
PLoS biology 2007;5(9):e237.
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2007: Zahir Farah; Firth Helen V; Baross Agnes; Delaney Allen D; Eydoux Patrice; Gibson William T; Langlois Sylvie; Martin Howard; Willatt Lionel; Marra Marco A; Friedman Jan M
Novel deletions of 14q11.2 associated with developmental delay, cognitive impairment and similar minor anomalies in three children.
Journal of medical genetics 2007;44(9):556-61.
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2007: Ruzanov Peter; Riddle Donald L; Marra Marco A; McKay Sheldon J; Jones Steven M
Genes that may modulate longevity in C. elegans in both dauer larvae and long-lived daf-2 adults.
Experimental gerontology 2007;42(8):825-39.
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2007: Etchberger John F; Lorch Adam; Sleumer Monica C; Zapf Richard; Jones Steven J; Marra Marco A; Holt Robert A; Moerman Donald G; Hobert Oliver
The molecular signature and cis-regulatory architecture of a C. elegans gustatory neuron.
Genes & development 2007;21(13):1653-74.
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2007: Zhao Yun; Raouf Afshin; Kent David; Khattra Jaswinder; Delaney Allen; Schnerch Angelique; Asano Jennifer; McDonald Helen; Chan Christina; Jones Steven; Marra Marco A; Eaves Connie J
A modified polymerase chain reaction-long serial analysis of gene expression protocol identifies novel transcripts in human CD34+ bone marrow cells.
Stem cells (Dayton, Ohio) 2007;25(7):1681-9.
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2007: Menten Björn; Buysse Karen; Zahir Farah; Hellemans Jan; Hamilton Sara J; Costa Teresa; Fagerstrom Carrie; Anadiotis George; Kingsbury Daniel; McGillivray Barbara C; Marra Marco A; Friedman Jan M; Speleman Frank; Mortier Geert
Osteopoikilosis, short stature and mental retardation as key features of a new microdeletion syndrome on 12q14.
Journal of medical genetics 2007;44(4):264-8.
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2007: McGhee James D; Sleumer Monica C; Bilenky Mikhail; Wong Kim; McKay Sheldon J; Goszczynski Barbara; Tian Helen; Krich Natisha D; Khattra Jaswinder; Holt Robert A; Baillie David L; Kohara Yuji; Marra Marco A; Jones Steven J M; Moerman Donald G; Robertson A Gordon
The ELT-2 GATA-factor and the global regulation of transcription in the C. elegans intestine.
Developmental biology 2007;302(2):627-45.
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2007: Khattra Jaswinder; Delaney Allen D; Zhao Yongjun; Siddiqui Asim; Asano Jennifer; McDonald Helen; Pandoh Pawan; Dhalla Noreen; Prabhu Anna-Liisa; Ma Kevin; Lee Stephanie; Ally Adrian; Tam Angela; Sa Danne; Rogers Sean; Charest David; Stott Jeff; Zuyderduyn Scott; Varhol Richard; Eaves Connie; Jones Steven; Holt Robert; Hirst Martin; Hoodless Pamela A; Marra Marco A
Large-scale production of SAGE libraries from microdissected tissues, flow-sorted cells, and cell lines.
Genome research 2007;17(1):108-16.
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2007: Baross Agnes; Delaney Allen D; Li H Irene; Nayar Tarun; Flibotte Stephane; Qian Hong; Chan Susanna Y; Asano Jennifer; Ally Adrian; Cao Manqiu; Birch Patricia; Brown-John Mabel; Fernandes Nicole; Go Anne; Kennedy Giulia; Langlois Sylvie; Eydoux Patrice; Friedman J M; Marra Marco A
Assessment of algorithms for high throughput detection of genomic copy number variation in oligonucleotide microarray data.
BMC bioinformatics 2007;8():368.
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2007: Hou Juan; Charters Anita M; Lee Sam C; Zhao Yongjun; Wu Mona K; Jones Steven J M; Marra Marco A; Hoodless Pamela A
A systematic screen for genes expressed in definitive endoderm by Serial Analysis of Gene Expression (SAGE).
BMC developmental biology 2007;7():92.
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2007: Quayle Steven N; Hare Heidi; Delaney Allen D; Hirst Martin; Hwang Dorothy; Schein Jacqueline E; Jones Steven J M; Marra Marco A; Sadar Marianne D
Novel expressed sequences identified in a model of androgen independent prostate cancer.
BMC genomics 2007;8():32.
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2006: Wang G; Jones S J M; Marra M A; Sadar M D
Identification of genes targeted by the androgen and PKA signaling pathways in prostate cancer cells.
Oncogene 2006;25(55):7311-23.
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2006: McLeod Michael P; Warren René L; Hsiao William W L; Araki Naoto; Myhre Matthew; Fernandes Clinton; Miyazawa Daisuke; Wong Wendy; Lillquist Anita L; Wang Dennis; Dosanjh Manisha; Hara Hirofumi; Petrescu Anca; Morin Ryan D; Yang George; Stott Jeff M; Schein Jacqueline E; Shin Heesun; Smailus Duane; Siddiqui Asim S; Marra Marco A; Jones Steven J M; Holt Robert; Brinkman Fiona S L; Miyauchi Keisuke; Fukuda Masao; Davies Julian E; Mohn William W; Eltis Lindsay D
The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(42):15582-7.
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2006: Ralph Steven G; Yueh Hesther; Friedmann Michael; Aeschliman Dana; Zeznik Jeffrey A; Nelson Colleen C; Butterfield Yaron S N; Kirkpatrick Robert; Liu Jerry; Jones Steven J M; Marra Marco A; Douglas Carl J; Ritland Kermit; Bohlmann Jörg
Conifer defence against insects: microarray gene expression profiling of Sitka spruce (Picea sitchensis) induced by mechanical wounding or feeding by spruce budworms (Choristoneura occidentalis) or white pine weevils (Pissodes strobi) reveals large-scale changes of the host transcriptome.
Plant, cell & environment 2006;29(8):1545-70.
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2006: Warren René L; Varabei Dmitry; Platt Darren; Huang Xiaoqiu; Messina David; Yang Shiaw-Pyng; Kronstad James W; Krzywinski Martin; Warren Wesley C; Wallis John W; Hillier LaDeana W; Chinwalla Asif T; Schein Jacqueline E; Siddiqui Asim S; Marra Marco A; Wilson Richard K; Jones Steven J M
Physical map-assisted whole-genome shotgun sequence assemblies.
Genome research 2006;16(6):768-75.
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2006: Wilson Gary M; Flibotte Stephane; Missirlis Perseus I; Marra Marco A; Jones Steven; Thornton Kevin; Clark Andrew G; Holt Robert A
Identification by full-coverage array CGH of human DNA copy number increases relative to chimpanzee and gorilla.
Genome research 2006;16(2):173-81.
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2006: Bainbridge Matthew N; Warren René L; Hirst Martin; Romanuik Tammy; Zeng Thomas; Go Anne; Delaney Allen; Griffith Malachi; Hickenbotham Matthew; Magrini Vincent; Mardis Elaine R; Sadar Marianne D; Siddiqui Asim S; Marra Marco A; Jones Steven J M
Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach.
BMC genomics 2006;7():246.
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2006: Siddiqui Asim S; Delaney Allen D; Schnerch Angelique; Griffith Obi L; Jones Steven J M; Marra Marco A
Sequence biases in large scale gene expression profiling data.
Nucleic acids research 2006;34(12):e83.
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2005: Everts-van der Wind Annelie; Larkin Denis M; Green Cheryl A; Elliott Janice S; Olmstead Colleen A; Chiu Readman; Schein Jacqueline E; Marra Marco A; Womack James E; Lewin Harris A
A high-resolution whole-genome cattle-human comparative map reveals details of mammalian chromosome evolution.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(51):18526-31.
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2005: Smailus Duane E; Marziali Andre; Dextras Philip; Marra Marco A; Holt Robert A
Simple, robust methods for high-throughput nanoliter-scale DNA sequencing.
Genome research 2005;15(10):1447-50.
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2005: Ng Siemon H S; Artieri Carlo G; Bosdet Ian E; Chiu Readman; Danzmann Roy G; Davidson William S; Ferguson Moira M; Fjell Christopher D; Hoyheim Bjorn; Jones Steven J M; de Jong Pieter J; Koop Ben F; Krzywinski Martin I; Lubieniecki Krzysztof; Marra Marco A; Mitchell Leslie A; Mathewson Carrie; Osoegawa Kazutoyo; Parisotto Sarah E; Phillips Ruth B; Rise Matthew L; von Schalburg Kristian R; Schein Jacqueline E; Shin Heesun; Siddiqui Asim; Thorsen Jim; Wye Natasja; Yang George; Zhu Baoli
A physical map of the genome of Atlantic salmon, Salmo salar.
Genomics 2005;86(4):396-404.
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2005: Warren René L; Butterfield Yaron S; Morin Ryan D; Siddiqui Asim S; Marra Marco A; Jones Steven J M
Management and visualization of whole genome shotgun assemblies using SAM.
BioTechniques 2005;38(5):715-6, 718, 720.
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2005: Blacque Oliver E; Perens Elliot A; Boroevich Keith A; Inglis Peter N; Li Chunmei; Warner Adam; Khattra Jaswinder; Holt Rob A; Ou Guangshuo; Mah Allan K; McKay Sheldon J; Huang Peter; Swoboda Peter; Jones Steve J M; Marra Marco A; Baillie David L; Moerman Donald G; Shaham Shai; Leroux Michel R
Functional genomics of the cilium, a sensory organelle.
Current biology : CB 2005;15(10):935-41.
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2005: Halaschek-Wiener Julius; Khattra Jaswinder S; McKay Sheldon; Pouzyrev Anatoli; Stott Jeff M; Yang George S; Holt Robert A; Jones Steven J M; Marra Marco A; Brooks-Wilson Angela R; Riddle Donald L
Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression.
Genome research 2005;15(5):603-15.
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2005: Lian Tianshun; Simmer Megan I; D'Souza Cletus A; Steen Barbara R; Zuyderduyn Scott D; Jones Steven J M; Marra Marco A; Kronstad James W
Iron-regulated transcription and capsule formation in the fungal pathogen Cryptococcus neoformans.
Molecular microbiology 2005;55(5):1452-72.
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2005: Yang George S; Stott Jeffery M; Smailus Duane; Barber Sarah A; Balasundaram Miruna; Marra Marco A; Holt Robert A
High-throughput sequencing: a failure mode analysis.
BMC genomics 2005;6(1):2.
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2004: Hirst Martin; Astell Caroline R; Griffith Malachi; Coughlin Shaun M; Moksa Michelle; Zeng Thomas; Smailus Duane E; Holt Robert A; Jones Steven; Marra Marco A; Petric Martin; Krajden Mel; Lawrence David; Mak Annie; Chow Ron; Skowronski Danuta M; Tweed S Aleina; Goh SweeHan; Brunham Robert C; Robinson John; Bowes Victoria; Sojonky Ken; Byrne Sean K; Li Yan; Kobasa Darwyn; Booth Tim; Paetzel Mark
Novel avian influenza H7N3 strain outbreak, British Columbia.
Emerging infectious diseases 2004;10(12):2192-5.
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2004: Warren René; Hsiao William W L; Kudo Hisashi; Myhre Matt; Dosanjh Manisha; Petrescu Anca; Kobayashi Hiroyuki; Shimizu Satoru; Miyauchi Keisuke; Masai Eiji; Yang George; Stott Jeff M; Schein Jacquie E; Shin Heesun; Khattra Jaswinder; Smailus Duane; Butterfield Yaron S; Siddiqui Asim; Holt Robert; Marra Marco A; Jones Steven J M; Mohn William W; Brinkman Fiona S L; Fukuda Masao; Davies Julian; Eltis Lindsay D
Functional characterization of a catabolic plasmid from polychlorinated- biphenyl-degrading Rhodococcus sp. strain RHA1.
Journal of bacteriology 2004;186(22):7783-95.
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2004: Baross Agnes; Butterfield Yaron S N; Coughlin Shaun M; Zeng Thomas; Griffith Malachi; Griffith Obi L; Petrescu Anca S; Smailus Duane E; Khattra Jaswinder; McDonald Helen L; McKay Sheldon J; Moksa Michelle; Holt Robert A; Marra Marco A
Systematic recovery and analysis of full-ORF human cDNA clones.
Genome research 2004;14(10B):2083-92.
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2004: Anglesio Michael S; Evdokimova Valentina; Melnyk Nataliya; Zhang Liyong; Fernandez Conrad V; Grundy Paul E; Leach Stephen; Marra Marco A; Brooks-Wilson Angela R; Penninger Josef; Sorensen Poul H B
Differential expression of a novel ankyrin containing E3 ubiquitin-protein ligase, Hace1, in sporadic Wilms' tumor versus normal kidney.
Human molecular genetics 2004;13(18):2061-74.
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2004: Flibotte Stephane; Chiu Readman; Fjell Chris; Krzywinski Martin; Schein Jacqueline E; Shin Heesun; Marra Marco A
Automated ordering of fingerprinted clones.
Bioinformatics (Oxford, England) 2004;20(8):1264-71.
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2004: Baross Agnes; Schertzer Mike; Zuyderduyn Scott D; Jones Steven J M; Marra Marco A; Lansdorp Peter M
Effect of TERT and ATM on gene expression profiles in human fibroblasts.
Genes, chromosomes & cancer 2004;39(4):298-310.
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2004: Rise Matthew L; von Schalburg Kristian R; Brown Gordon D; Mawer Melanie A; Devlin Robert H; Kuipers Nathanael; Busby Maura; Beetz-Sargent Marianne; Alberto Roberto; Gibbs A Ross; Hunt Peter; Shukin Robert; Zeznik Jeffrey A; Nelson Colleen; Jones Simon R M; Smailus Duane E; Jones Steven J M; Schein Jacqueline E; Marra Marco A; Butterfield Yaron S N; Stott Jeff M; Ng Siemon H S; Davidson William S; Koop Ben F
Development and application of a salmonid EST database and cDNA microarray: data mining and interspecific hybridization characteristics.
Genome research 2004;14(3):478-90.
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2004: Krzywinski Martin; Bosdet Ian; Smailus Duane; Chiu Readman; Mathewson Carrie; Wye Natasja; Barber Sarah; Brown-John Mabel; Chan Susanna; Chand Steve; Cloutier Alison; Girn Noreen; Lee Darlene; Masson Amara; Mayo Michael; Olson Teika; Pandoh Pawan; Prabhu Anna-Liisa; Schoenmakers Eric; Tsai Miranda; Albertson Donna; Lam Wan; Choy Chik-On; Osoegawa Kazutoyo; Zhao Shaying; de Jong Pieter J; Schein Jacqueline; Jones Steven; Marra Marco A
A set of BAC clones spanning the human genome.
Nucleic acids research 2004;32(12):3651-60.
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2003: Fjell Christopher D; Bosdet Ian; Schein Jacqueline E; Jones Steven J M; Marra Marco A
Internet Contig Explorer (iCE)--a tool for visualizing clone fingerprint maps.
Genome research 2003;13(6A):1244-9.
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2003: Pleasance Erin D; Marra Marco A; Jones Steven J M
Assessment of SAGE in transcript identification.
Genome research 2003;13(6A):1203-15.
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2003: Fuhrmann Daniel R; Krzywinski Martin I; Chiu Readman; Saeedi Parvaneh; Schein Jacqueline E; Bosdet Ian E; Chinwalla Asif; Hillier LaDeana W; Waterston Robert H; McPherson John D; Jones Steven J M; Marra Marco A
Software for automated analysis of DNA fingerprinting gels.
Genome research 2003;13(5):940-53.
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2003: Gorski Sharon M; Chittaranjan Suganthi; Pleasance Erin D; Freeman J D; Anderson Carrie L; Varhol Richard J; Coughlin Shaun M; Zuyderduyn Scott D; Jones Steven J M; Marra Marco A
A SAGE approach to discovery of genes involved in autophagic cell death.
Current biology : CB 2003;13(4):358-63.
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2002: Schein Jacqueline E; Tangen Kristin L; Chiu Readman; Shin Heesun; Lengeler Klaus B; MacDonald William Kim; Bosdet Ian; Heitman Joseph; Jones Steven J M; Marra Marco A; Kronstad James W
Physical maps for genome analysis of serotype A and D strains of the fungal pathogen Cryptococcus neoformans.
Genome research 2002;12(9):1445-53.
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2002: Shevchenko Yuriy; Bouffard Gerard G; Butterfield Yaron S N; Blakesley Robert W; Hartley James L; Young Alice C; Marra Marco A; Jones Steven J M; Touchman Jeffrey W; Green Eric D
Systematic sequencing of cDNA clones using the transposon Tn5.
Nucleic acids research 2002;30(11):2469-77.
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2002: Butterfield Yaron S N; Marra Marco A; Asano Jennifer K; Chan Susanna Y; Guin Ranabir; Krzywinski Martin I; Lee Soo Sen; MacDonald Kim W K; Mathewson Carrie A; Olson Teika E; Pandoh Pawan K; Prabhu Anna-Liisa; Schnerch Angelique; Skalska Ursula; Smailus Duane E; Stott Jeff M; Tsai Miranda I; Yang George S; Zuyderduyn Scott D; Schein Jacqueline E; Jones Steven J M
An efficient strategy for large-scale high-throughput transposon-mediated sequencing of cDNA clones.
Nucleic acids research 2002;30(11):2460-8.
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2002: Ness S R; Terpstra W; Krzywinski M; Marra M A; Jones S J M
Assembly of fingerprint contigs: parallelized FPC.
Bioinformatics (Oxford, England) 2002;18(3):484-5.
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2001: Jones S J; Riddle D L; Pouzyrev A T; Velculescu V E; Hillier L; Eddy S R; Stricklin S L; Baillie D L; Waterston R; Marra M A
Changes in gene expression associated with developmental arrest and longevity in Caenorhabditis elegans.
Genome research 2001;11(8):1346-52.
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2001: Wendl M C; Marra M A; Hillier L W; Chinwalla A T; Wilson R K; Waterston R H
Theories and applications for sequencing randomly selected clones.
Genome research 2001;11(2):274-80.
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1999: Marra M A; Kucaba T A; Hillier L W; Waterston R H
High-throughput plasmid DNA purification for 3 cents per sample.
Nucleic acids research 1999;27(24):e37.
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1999: Ellsworth R E; Ionasescu V; Searby C; Sheffield V C; Braden V V; Kucaba T A; McPherson J D; Marra M A; Green E D
The CMT2D locus: refined genetic position and construction of a bacterial clone-based physical map.
Genome research 1999;9(6):568-74.
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1999: Vatcher G P; Barbazuk W B; O'Neil N J; Marra M A; Ha T; Baillie D L
Identification and characterization of a serine hydroxymethyltransferase isoform in Caenorhabditis briggsae.
Gene 1999;230(2):137-44.
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1999: Thacker C; Marra M A; Jones A; Baillie D L; Rose A M
Functional genomics in Caenorhabditis elegans: An approach involving comparisons of sequences from related nematodes.
Genome research 1999;9(4):348-59.
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1998: Marra M A; Hillier L; Waterston R H
Expressed sequence tags--ESTablishing bridges between genomes.
Trends in genetics : TIG 1998;14(1):4-7.
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1997: Marra M A; Kucaba T A; Dietrich N L; Green E D; Brownstein B; Wilson R K; McDonald K M; Hillier L W; McPherson J D; Waterston R H
High throughput fingerprint analysis of large-insert clones.
Genome research 1997;7(11):1072-84.
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1997: Chissoe S L; Marra M A; Hillier L; Brinkman R; Wilson R K; Waterston R H
Representation of cloned genomic sequences in two sequencing vectors: correlation of DNA sequence and subclone distribution.
Nucleic acids research 1997;25(15):2960-6.
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1996: Marra M; Weinstock L A; Mardis E R
End sequence determination from large insert clones using energy transfer fluorescent primers.
Genome research 1996;6(11):1118-22.
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1996: Hillier L D; Lennon G; Becker M; Bonaldo M F; Chiapelli B; Chissoe S; Dietrich N; DuBuque T; Favello A; Gish W; Hawkins M; Hultman M; Kucaba T; Lacy M; Le M; Le N; Mardis E; Moore B; Morris M; Parsons J; Prange C; Rifkin L; Rohlfing T; Schellenberg K; Bento Soares M; Tan F; Thierry-Meg J; Trevaskis E; Underwood K; Wohldman P; Waterston R; Wilson R; Marra M
Generation and analysis of 280,000 human expressed sequence tags.
Genome research 1996;6(9):807-28.
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