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Richard Mathies

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TOP 3
Erik C Jensen; Jungkyu Kim; Abhisek Bera; Thomas N Chiesl; Amanda M Stockton; Richard A Mathies
Digitally programmable microfluidic automaton for multiscale combinatorial mixing and sample processing.
Tomotsumi Fujisawa; Mark Creelman; Richard A Mathies
Structural dynamics of a noncovalent charge transfer complex from femtosecond stimulated Raman spectroscopy.
Hiroaki Onoe; Carolyn R Bertozzi; Erik S Douglas; Matt B Francis; Zev J Gartner; Sonny C Hsiao; Richard A Mathies
Cellular microfabrication: observing intercellular interactions using lithographically-defined DNA capture sequences.

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All Publications

2013: Erik C Jensen; Jungkyu Kim; Abhisek Bera; Thomas N Chiesl; Amanda M Stockton; Richard A Mathies
Digitally programmable microfluidic automaton for multiscale combinatorial mixing and sample processing.
Lab on a chip 2013;13(2):288-96.
2012: Tomotsumi Fujisawa; Mark Creelman; Richard A Mathies
Structural dynamics of a noncovalent charge transfer complex from femtosecond stimulated Raman spectroscopy.
The journal of physical chemistry. B 2012;116(35):10453-60.
2012: Hiroaki Onoe; Carolyn R Bertozzi; Erik S Douglas; Matt B Francis; Zev J Gartner; Sonny C Hsiao; Richard A Mathies
Cellular microfabrication: observing intercellular interactions using lithographically-defined DNA capture sequences.
Langmuir : the ACS journal of surfaces and colloids 2012;28(21):8120-6.
2012: David P Hoffman; Richard A Mathies
Photoexcited structural dynamics of an azobenzene analog 4-nitro-4'-dimethylamino-azobenzene from femtosecond stimulated Raman.
Physical chemistry chemical physics : PCCP 2012;14(18):6298-306.
2012: Amy A Twite; Sonny C Hsiao; Richard A Mathies; Hiroaki Onoe; Matt B Francis
Direct attachment of microbial organisms to material surfaces through sequence-specific DNA hybridization.
Advanced materials (Deerfield Beach, Fla.) 2012;24(18):2380-5.
2012: Jungkyu Kim; Erik C Jensen; Minjee Kang; Richard A Mathies
Lifting gate polydimethylsiloxane microvalves and pumps for microfluidic control.
Analytical chemistry 2012;84(4):2067-71.
2012: Katelyn M Spillane; Jyotishman Dasgupta; Richard A Mathies
Conformational homogeneity and excited-state isomerization dynamics of the bilin chromophore in phytochrome Cph1 from resonance Raman intensities.
Biophysical journal 2012;102(3):709-17.
2012: Hans K Carlson; Manfred Auer; Amita Gorur; Anthony T Iavarone; Richard A Mathies; Ryan A Melnyk; Rosalie Tran; Boon Siang Yeo; John D Coates
Surface multiheme c-type cytochromes from Thermincola potens and implications for respiratory metal reduction by Gram-positive bacteria.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(5):1702-7.
2012: Avraham Bromberg; Erik C Jensen; Yun Kyung Jung; Jungkyu Kim; Richard A Mathies
Microfabricated linear hydrogel microarray for single-nucleotide polymorphism detection.
Analytical chemistry 2012;84(2):963-70.
2012: Peng Liu; James R Scherer; Stephanie H I Yeung; Susan A Greenspoon; Richard A Mathies
Integrated sample cleanup and microchip capillary array electrophoresis for high-performance forensic STR profiling.
Methods in molecular biology (Clifton, N.J.) 2012;830():351-65.
2011: Peng Liu; Thomas N Chiesl; Susan A Greenspoon; James R Scherer; Richard A Mathies
Integrated sample cleanup and capillary array electrophoresis microchip for forensic short tandem repeat analysis.
Forensic science international. Genetics 2011;5(5):484-92.
2011: Jungkyu Kim; Bernhard Boser; Erik C Jensen; Mischa Megens; Richard A Mathies
Integrated microfluidic bioprocessor for solid phase capture immunoassays.
Lab on a chip 2011;11(18):3106-12.
2011: Emily E Weinert; Richard A Mathies; Christine M Phillips-Piro; Rosalie Tran; Michael A Marletta
Controlling conformational flexibility of an O₂-binding H-NOX domain.
Biochemistry 2011;50(32):6832-40.
2011: Rosalie Tran; Emily E Weinert; Elizabeth M Boon; Richard A Mathies; Michael A Marletta
Determinants of the heme-CO vibrational modes in the H-NOX family.
Biochemistry 2011;50(30):6519-30.
2011: Amanda M Stockton; Caroline Chandra Tjin; Thomas N Chiesl; Richard A Mathies
Analysis of carbonaceous biomarkers with the Mars Organic Analyzer microchip capillary electrophoresis system: carboxylic acids.
Astrobiology 2011;11(6):519-28.
2011: Peng Liu; Xiujun Li; Susan A Greenspoon; James R Scherer; Richard A Mathies
Integrated DNA purification, PCR, sample cleanup, and capillary electrophoresis microchip for forensic human identification.
Lab on a chip 2011;11(6):1041-8.
2011: Richard Novak; Yong Zeng; Joe Shuga; Gautham Venugopalan; Daniel A Fletcher; Martyn T Smith; Richard A Mathies
Single-cell multiplex gene detection and sequencing with microfluidically generated agarose emulsions.
Angewandte Chemie (International ed. in English) 2011;50(2):390-5.
2010: Numrin Thaitrong; Peng Liu; Thomas Briese; W Ian Lipkin; Thomas N Chiesl; Yukiko Higa; Richard A Mathies
Integrated capillary electrophoresis microsystem for multiplex analysis of human respiratory viruses.
Analytical chemistry 2010;82(24):10102-9.
2010: James R Scherer; Peng Liu; Richard A Mathies
Design and operation of a portable scanner for high performance microchip capillary array electrophoresis.
The Review of scientific instruments 2010;81(11):113105.
2010: Amanda M Stockton; Caroline Chandra Tjin; Grace L Huang; Merwan Benhabib; Thomas N Chiesl; Richard A Mathies
Analysis of carbonaceous biomarkers with the Mars Organic Analyzer microchip capillary electrophoresis system: aldehydes and ketones.
Electrophoresis 2010;31(22):3642-9.
2010: Joe Shuga; Yong Zeng; Richard Novak; Richard A Mathies; Pierre Hainaut; Martyn T Smith
Selected technologies for measuring acquired genetic damage in humans.
Environmental and molecular mutagenesis 2010;51(8-9):851-70.
2010: Boon-Siang Yeo; Shannon L Klaus; Philip N Ross; Richard A Mathies; Alexis T Bell
Identification of hydroperoxy species as reaction intermediates in the electrochemical evolution of oxygen on gold.
Chemphyschem : a European journal of chemical physics and physical chemistry 2010;11(9):1854-7.
2010: Yong Zeng; Richard Novak; Joe Shuga; Martyn T Smith; Richard A Mathies
High-performance single cell genetic analysis using microfluidic emulsion generator arrays.
Analytical chemistry 2010;82(8):3183-90.
2010: Erik C Jensen; Bharath P Bhat; Richard A Mathies
A digital microfluidic platform for the automation of quantitative biomolecular assays.
Lab on a chip 2010;10(6):685-91.
2010: Merwan Benhabib; Thomas N Chiesl; Amanda M Stockton; James R Scherer; Richard A Mathies
Multichannel capillary electrophoresis microdevice and instrumentation for in situ planetary analysis of organic molecules and biomarkers.
Analytical chemistry 2010;82(6):2372-9.
2009: Chong Fang; Renee R Frontiera; Rosalie Tran; Richard A Mathies
Mapping GFP structure evolution during proton transfer with femtosecond Raman spectroscopy.
Nature 2009;462(7270):200-4.
2009: Renee R Frontiera; Jyotishman Dasgupta; Richard A Mathies
Probing interfacial electron transfer in coumarin 343 sensitized TiO2 nanoparticles with femtosecond stimulated Raman.
Journal of the American Chemical Society 2009;131(43):15630-2.
2009: Amanda M Stockton; Thomas N Chiesl; Tim K Lowenstein; Xenia Amashukeli; Frank Grunthaner; Richard A Mathies
Capillary electrophoresis analysis of organic amines and amino acids in saline and acidic samples using the Mars organic analyzer.
Astrobiology 2009;9(9):823-31.
2009: Katelyn M Spillane; Jyotishman Dasgupta; J Clark Lagarias; Richard A Mathies
Homogeneity of phytochrome Cph1 vibronic absorption revealed by resonance Raman intensity analysis.
Journal of the American Chemical Society 2009;131(39):13946-8.
2009: Peng Liu; Richard A Mathies
Integrated microfluidic systems for high-performance genetic analysis.
Trends in biotechnology 2009;27(10):572-81.
2009: Erik S Douglas; Sonny C Hsiao; Hiroaki Onoe; Carolyn R Bertozzi; Matt B Francis; Richard A Mathies
DNA-barcode directed capture and electrochemical metabolic analysis of single mammalian cells on a microelectrode array.
Lab on a chip 2009;9(14):2010-5.
2009: Sangdeok Shim; Jyotishman Dasgupta; Richard A Mathies
Femtosecond time-resolved stimulated Raman reveals the birth of bacteriorhodopsin's J and K intermediates.
Journal of the American Chemical Society 2009;131(22):7592-7.
2009: Nathaniel Beyor; Lina Yi; Tae Seok Seo; Richard A Mathies
Integrated capture, concentration, polymerase chain reaction, and capillary electrophoretic analysis of pathogens on a chip.
Analytical chemistry 2009;81(9):3523-8.
2009: Thomas N Chiesl; Wai K Chu; Amanda M Stockton; Xenia Amashukeli; Frank Grunthaner; Richard A Mathies
Enhanced amine and amino acid analysis using Pacific Blue and the Mars Organic Analyzer microchip capillary electrophoresis system.
Analytical chemistry 2009;81(7):2537-44.
2009: Numrin Thaitrong; Nicholas M Toriello; Nadia Del Bueno; Richard A Mathies
Polymerase chain reaction-capillary electrophoresis genetic analysis microdevice with in-line affinity capture sample injection.
Analytical chemistry 2009;81(4):1371-7.
2009: Jyotishman Dasgupta; Renee R Frontiera; Keenan C Taylor; J Clark Lagarias; Richard A Mathies
Ultrafast excited-state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(6):1784-9.
2009: Amanda M Stockton; Thomas N Chiesl; James R Scherer; Richard A Mathies
Polycyclic aromatic hydrocarbon analysis with the Mars organic analyzer microchip capillary electrophoresis system.
Analytical chemistry 2009;81(2):790-6.
2009: Stephanie H I Yeung; Peng Liu; Nadia Del Bueno; Susan A Greenspoon; Richard A Mathies
Integrated sample cleanup-capillary electrophoresis microchip for high-performance short tandem repeat genetic analysis.
Analytical chemistry 2009;81(1):210-7.
2008: Nathaniel Beyor; Tae Seok Seo; Peng Liu; Richard A Mathies
Immunomagnetic bead-based cell concentration microdevice for dilute pathogen detection.
Biomedical microdevices 2008;10(6):909-17.
2008: Amanda L Smeigh; Mark Creelman; Richard A Mathies; James K McCusker
Femtosecond time-resolved optical and Raman spectroscopy of photoinduced spin crossover: temporal resolution of low-to-high spin optical switching.
Journal of the American Chemical Society 2008;130(43):14105-7.
2008: Renee R Frontiera; Sangdeok Shim; Richard A Mathies
Origin of negative and dispersive features in anti-Stokes and resonance femtosecond stimulated Raman spectroscopy.
The Journal of chemical physics 2008;129(6):064507.
2008: Susan A Greenspoon; Stephanie H I Yeung; Kelly R Johnson; Wai K Chu; Han N Rhee; Amy B McGuckian; Cecelia A Crouse; Thomas N Chiesl; Annelise E Barron; James R Scherer; Jeffrey D Ban; Richard A Mathies
A forensic laboratory tests the Berkeley microfabricated capillary array electrophoresis device.
Journal of forensic sciences 2008;53(4):828-37.
2008: Andrew D Aubrey; John H Chalmers; Jeffrey L Bada; Frank J Grunthaner; Xenia Amashukeli; Peter Willis; Alison M Skelley; Richard A Mathies; Richard C Quinn; Aaron P Zent; Pascale Ehrenfreund; Ron Amundson; Daniel P Glavin; Oliver Botta; Laurence Barron; Diana L Blaney; Benton C Clark; Max Coleman; Beda A Hofmann; Jean-Luc Josset; Petra Rettberg; Sally Ride; François Robert; Mark A Sephton; Albert Yen
The Urey instrument: an advanced in situ organic and oxidant detector for Mars exploration.
Astrobiology 2008;8(3):583-95.
2008: Stephanie H I Yeung; Igor L Medintz; Susan A Greenspoon; Richard A Mathies
Rapid determination of monozygous twinning with a microfabricated capillary array electrophoresis genetic-analysis device.
Clinical chemistry 2008;54(6):1080-4.
2008: Stephanie H I Yeung; Tae Seok Seo; Cecelia A Crouse; Susan A Greenspoon; Thomas N Chiesl; Jeff D Ban; Richard A Mathies
Fluorescence energy transfer-labeled primers for high-performance forensic DNA profiling.
Electrophoresis 2008;29(11):2251-9.
2008: Palani Kumaresan; Chaoyong James Yang; Samantha A Cronier; Robert G Blazej; Richard A Mathies
High-throughput single copy DNA amplification and cell analysis in engineered nanoliter droplets.
Analytical chemistry 2008;80(10):3522-9.
2008: Sangdeok Shim; Richard A Mathies
Development of a tunable femtosecond stimulated raman apparatus and its application to beta-carotene.
The journal of physical chemistry. B 2008;112(15):4826-32.
2008: Sangdeok Shim; Christina M Stuart; Richard A Mathies
Resonance Raman cross-sections and vibronic analysis of rhodamine 6G from broadband stimulated Raman spectroscopy.
Chemphyschem : a European journal of chemical physics and physical chemistry 2008;9(5):697-9.
2007: Emory M Chan; Matthew A Marcus; Sirine Fakra; Mariam ElNaggar; Richard A Mathies; A. Paul Alivisatos
Millisecond kinetics of nanocrystal cation exchange using microfluidic X-ray absorption spectroscopy.
The journal of physical chemistry. A 2007;111(49):12210-5.
2007: Christina M Stuart; Renee R Frontiera; Richard A Mathies
Excited-state structure and dynamics of cis- and trans-Azobenzene from resonance Raman intensity analysis.
The journal of physical chemistry. A 2007;111(48):12072-80.
2007: Nicholas M Toriello; Chung N Liu; Robert G Blazej; Numrin Thaitrong; Richard A Mathies
Integrated affinity capture, purification, and capillary electrophoresis microdevice for quantitative double-stranded DNA analysis.
Analytical chemistry 2007;79(22):8549-56.
2007: Erik S Douglas; Ravi A Chandra; Carolyn R Bertozzi; Richard A Mathies; Matt B Francis
Self-assembled cellular microarrays patterned using DNA barcodes.
Lab on a chip 2007;7(11):1442-8.
2007: Christine N Jayarajah; Alison M Skelley; Angela D Fortner; Richard A Mathies
Analysis of neuroactive amines in fermented beverages using a portable microchip capillary electrophoresis system.
Analytical chemistry 2007;79(21):8162-9.
2007: Charles A Emrich; Igor L Medintz; Wai K Chu; Richard A Mathies
Microfabricated two-dimensional electrophoresis device for differential protein expression profiling.
Analytical chemistry 2007;79(19):7360-6.
2007: Renee R Frontiera; Richard A Mathies
Polarization dependence of vibrational coupling signals in femtosecond stimulated Raman spectroscopy.
The Journal of chemical physics 2007;127(12):124501.
2007: Christina M Stuart; Michael J Tauber; Richard A Mathies
Structure and dynamics of the solvated electron in alcohols from resonance Raman spectroscopy.
The journal of physical chemistry. A 2007;111(34):8390-400.
2007: Robert G Blazej; Palani Kumaresan; Samantha A Cronier; Richard A Mathies
Inline injection microdevice for attomole-scale sanger DNA sequencing.
Analytical chemistry 2007;79(12):4499-506.
2007: Adeyemi A Adesokan; Duohai Pan; Erick Fredj; Richard A Mathies; R Benny Gerber
Anharmonic vibrational calculations modeling the raman spectra of intermediates in the photoactive yellow protein (PYP) photocycle.
Journal of the American Chemical Society 2007;129(15):4584-94.
2007: Peng Liu; Tae Seok Seo; Nathaniel Beyor; Kyoung-Jin Shin; James R Scherer; Richard A Mathies
Integrated portable polymerase chain reaction-capillary electrophoresis microsystem for rapid forensic short tandem repeat typing.
Analytical chemistry 2007;79(5):1881-9.
2007: Philipp Kukura; David W McCamant; Richard A Mathies
Femtosecond stimulated Raman spectroscopy.
Annual review of physical chemistry 2007;58():461-88.
2006: Alison M Skelley; H James Cleaves; Christine N Jayarajah; Jeffrey L Bada; Richard A Mathies
Application of the Mars Organic Analyzer to nucleobase and amine biomarker detection.
Astrobiology 2006;6(6):824-37.
2006: Nicholas M Toriello; Chung N Liu; Richard A Mathies
Multichannel reverse transcription-polymerase chain reaction microdevice for rapid gene expression and biomarker analysis.
Analytical chemistry 2006;78(23):7997-8003.
2006: Alison M Skelley; Richard A Mathies
Rapid on-column analysis of glucosamine and its mutarotation by microchip capillary electrophoresis.
Journal of chromatography. A 2006;1132(1-2):304-9.
2006: Brian M Paegel; William H Grover; Alison M Skelley; Richard A Mathies; Gerald F Joyce
Microfluidic serial dilution circuit.
Analytical chemistry 2006;78(21):7522-7.
2006: Philipp Kukura; Sangwoon Yoon; Richard A Mathies
Femtosecond stimulated Raman spectroscopy.
Analytical chemistry 2006;78(17):5953-9.
2006: Elizabeth M Boon; Joseph H Davis; Rosalie Tran; David S Karow; Shirley H Huang; Duohai Pan; Michael M Miazgowicz; Richard A Mathies; Michael A Marletta
Nitric oxide binding to prokaryotic homologs of the soluble guanylate cyclase beta1 H-NOX domain.
The Journal of biological chemistry 2006;281(31):21892-902.
2006: Chung N Liu; Nicholas M Toriello; Richard A Mathies
Multichannel PCR-CE microdevice for genetic analysis.
Analytical chemistry 2006;78(15):5474-9.
2006: Stephanie H I Yeung; Susan A Greenspoon; Amy McGuckian; Cecelia A Crouse; Charles A Emrich; Jeffrey D Ban; Richard A Mathies
Rapid and high-throughput forensic short tandem repeat typing using a 96-lane microfabricated capillary array electrophoresis microdevice.
Journal of forensic sciences 2006;51(4):740-7.
2006: Philipp Kukura; Renee R Frontiera; Richard A Mathies
Direct observation of anharmonic coupling in the time domain with femtosecond stimulated Raman scattering.
Physical review letters 2006;96(23):238303.
2006: Robert G Blazej; Palani Kumaresan; Richard A Mathies
Microfabricated bioprocessor for integrated nanoliter-scale Sanger DNA sequencing.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(19):7240-5.
2006: William H Grover; Robin H C Ivester; Erik C Jensen; Richard A Mathies
Development and multiplexed control of latching pneumatic valves using microfluidic logical structures.
Lab on a chip 2006;6(5):623-31.
2006: Ravi A Chandra; Erik S Douglas; Richard A Mathies; Carolyn R Bertozzi; Matt B Francis
Programmable cell adhesion encoded by DNA hybridization.
Angewandte Chemie (International ed. in English) 2006;45(6):896-901.
2005: David S Karow; Duohai Pan; Joseph H Davis; Sönke Behrends; Richard A Mathies; Michael A Marletta
Characterization of functional heme domains from soluble guanylate cyclase.
Biochemistry 2005;44(49):16266-74.
2005: Emily R Derbyshire; Rosalie Tran; Richard A Mathies; Michael A Marletta
Characterization of nitrosoalkane binding and activation of soluble guanylate cyclase.
Biochemistry 2005;44(49):16257-65.
2005: Philipp Kukura; David W McCamant; Sangwoon Yoon; Daniel B Wandschneider; Richard A Mathies
Structural observation of the primary isomerization in vision with femtosecond-stimulated Raman.
Science (New York, N.Y.) 2005;310(5750):1006-9.
2005: Nicholas M Toriello; Erik S Douglas; Richard A Mathies
Microfluidic device for electric field-driven single-cell capture and activation.
Analytical chemistry 2005;77(21):6935-41.
2005: Emory M Chan; A. Paul Alivisatos; Richard A Mathies
High-temperature microfluidic synthesis of CdSe nanocrystals in nanoliter droplets.
Journal of the American Chemical Society 2005;127(40):13854-61.
2005: William H Grover; Richard A Mathies
An integrated microfluidic processor for single nucleotide polymorphism-based DNA computing.
Lab on a chip 2005;5(10):1033-40.
2005: Cecelia A Crouse; Stephanie Yeung; Susan Greenspoon; Amy McGuckian; Julie Sikorsky; Jeff Ban; Richard A Mathies
Improving efficiency of a small forensic DNA laboratory: validation of robotic assays and evaluation of microcapillary array device.
Croatian medical journal 2005;46(4):563-77.
2005: T Kamei; Nicholas M Toriello; ET Lagally; Robert G Blazej; James R Scherer; R A Street; Richard A Mathies
Microfluidic genetic analysis with an integrated a-Si:H detector.
Biomedical microdevices 2005;7(2):147-52.
2005: David W McCamant; Philipp Kukura; Richard A Mathies
Femtosecond stimulated Raman study of excited-state evolution in bacteriorhodopsin.
The journal of physical chemistry. B 2005;109(20):10449-57.
2005: Huijun Tian; Charles A Emrich; James R Scherer; Richard A Mathies; Paal Skytt Andersen; Lars Larsen; Michael Christiansen
High-throughput single-strand conformation polymorphism analysis on a microfabricated capillary array electrophoresis device.
Electrophoresis 2005;26(9):1834-42.
2005: Alison M Skelley; James R Scherer; Andrew D Aubrey; William H Grover; Robin H C Ivester; Pascale Ehrenfreund; Frank J Grunthaner; Jeffrey L Bada; Richard A Mathies
Development and evaluation of a microdevice for amino acid biomarker detection and analysis on Mars.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(4):1041-6.
2005: Sangwoon Yoon; David W McCamant; Philipp Kukura; Richard A Mathies; Donghui Zhang; Soo-Y Lee
Dependence of line shapes in femtosecond broadband stimulated Raman spectroscopy on pump-probe time delay.
The Journal of chemical physics 2005;122(2):024505.
2004: David W McCamant; Philipp Kukura; Sangwoon Yoon; Richard A Mathies
Femtosecond broadband stimulated Raman spectroscopy: Apparatus and methods.
The Review of scientific instruments 2004;75(11):4971-80.
2004: Erin A S Doherty; Cheuk-Wai Kan; Brian M Paegel; Stephanie H I Yeung; Shitong Cao; Richard A Mathies; Annelise E Barron
Sparsely cross-linked "nanogel" matrixes as fluid, mechanically stabilized polymer networks for high-throughput microchannel DNA sequencing.
Analytical chemistry 2004;76(18):5249-56.
2004: Elsa C Y Yan; Ziad Ganim; Manija A Kazmi; Belinda S W Chang; Thomas P Sakmar; Richard A Mathies
Resonance Raman analysis of the mechanism of energy storage and chromophore distortion in the primary visual photoproduct.
Biochemistry 2004;43(34):10867-76.
2004: Soo-Y Lee; Donghui Zhang; David W McCamant; Philipp Kukura; Richard A Mathies
Theory of femtosecond stimulated Raman spectroscopy.
The Journal of chemical physics 2004;121(8):3632-42.
2004: David S Karow; Duohai Pan; Rosalie Tran; Patricia Pellicena; Andrew Presley; Richard A Mathies; Michael A Marletta
Spectroscopic characterization of the soluble guanylate cyclase-like heme domains from Vibrio cholerae and Thermoanaerobacter tengcongensis.
Biochemistry 2004;43(31):10203-11.
2004: Philipp Kukura; David W McCamant; Richard A Mathies
Femtosecond Time-Resolved Stimulated Raman Spectroscopy of the S(2) (1B(u)) Excited State of beta-Carotene.
The journal of physical chemistry. A 2004;108(28):5921-5.
2004: Peter Ertl; Charles A Emrich; Pankaj Singhal; Richard A Mathies
Capillary electrophoresis chips with a sheath-flow supported electrochemical detection system.
Analytical chemistry 2004;76(13):3749-55.
2004: Avraham Bromberg; Richard A Mathies
Multichannel homogeneous immunoassay for detection of 2,4,6-trinitrotoluene (TNT) using a microfabricated capillary array electrophoresis chip.
Electrophoresis 2004;25(12):1895-900.
2004: ET Lagally; James R Scherer; Robert G Blazej; Nicholas M Toriello; Binh An Diep; M Ramchandani; George F Sensabaugh; Lee W Riley; Richard A Mathies
Integrated portable genetic analysis microsystem for pathogen/infectious disease detection.
Analytical chemistry 2004;76(11):3162-70.
2004: Duohai Pan; Andrew Philip; Wouter D Hoff; Richard A Mathies
Time-resolved resonance raman structural studies of the pB' intermediate in the photocycle of photoactive yellow protein.
Biophysical journal 2004;86(4):2374-82.
2004: Michael J Tauber; Christina M Stuart; Richard A Mathies
Resonance Raman spectra of electrons solvated in liquid alcohols.
Journal of the American Chemical Society 2004;126(11):3414-5.
2003: Alison M Skelley; Richard A Mathies
Chiral separation of fluorescamine-labeled amino acids using microfabricated capillary electrophoresis devices for extraterrestrial exploration.
Journal of chromatography. A 2003;1021(1-2):191-9.
2003: David W McCamant; Philipp Kukura; Richard A Mathies
Femtosecond broadband stimulated Raman: a new approach for high-performance vibrational spectroscopy.
Applied spectroscopy 2003;57(11):1317-23.
2003: Toshihiro Kamei; Brian M Paegel; James R Scherer; Alison M Skelley; Robert A Street; Richard A Mathies
Integrated hydrogenated amorphous Si photodiode detector for microfluidic bioanalytical devices.
Analytical chemistry 2003;75(20):5300-5.
2003: David W McCamant; Philipp Kukura; Richard A Mathies
Femtosecond Time-Resolved Stimulated Raman Spectroscopy: Application to the Ultrafast Internal Conversion in beta-Carotene.
The journal of physical chemistry. A 2003;107(40):8208-14.
2003: Elsa C Y Yan; Manija A Kazmi; Ziad Ganim; Harvey J M Hou; Duohai Pan; Belinda S W Chang; Thomas P Sakmar; Richard A Mathies
Retinal counterion switch in the photoactivation of the G protein-coupled receptor rhodopsin.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(16):9262-7.
2003: Judy E Kim; Duohai Pan; Richard A Mathies
Picosecond dynamics of G-protein coupled receptor activation in rhodopsin from time-resolved UV resonance Raman spectroscopy.
Biochemistry 2003;42(18):5169-75.
2003: Judy E Kim; Michael J Tauber; Richard A Mathies
Analysis of the mode-specific excited-state energy distribution and wavelength-dependent photoreaction quantum yield in rhodopsin.
Biophysical journal 2003;84(4):2492-501.
2003: Avraham Bromberg; Richard A Mathies
Homogeneous immunoassay for detection of TNT and its analogues on a microfabricated capillary electrophoresis chip.
Analytical chemistry 2003;75(5):1188-95.
2003: Michael J Tauber; Richard A Mathies
Structure of the aqueous solvated electron from resonance Raman spectroscopy: lessons from isotopic mixtures.
Journal of the American Chemical Society 2003;125(5):1394-402.
2003: Robert G Blazej; Brian M Paegel; Richard A Mathies
Polymorphism ratio sequencing: a new approach for single nucleotide polymorphism discovery and genotyping.
Genome research 2003;13(2):287-93.
2003: Brian M Paegel; Robert G Blazej; Richard A Mathies
Microfluidic devices for DNA sequencing: sample preparation and electrophoretic analysis.
Current opinion in biotechnology 2003;14(1):42-50.
2002: Brian M Paegel; Stephanie H I Yeung; Richard A Mathies
Microchip bioprocessor for integrated nanovolume sample purification and DNA sequencing.
Analytical chemistry 2002;74(19):5092-8.
2002: Charles A Emrich; Huijun Tian; Igor L Medintz; Richard A Mathies
Microfabricated 384-lane capillary array electrophoresis bioanalyzer for ultrahigh-throughput genetic analysis.
Analytical chemistry 2002;74(19):5076-83.
2002: Judy E Kim; Richard A Mathies
Anti-stokes Raman study of vibrational cooling dynamics in the primary photochemistry of rhodopsin.
The journal of physical chemistry. A 2002;106(37):8508-15.
2002: David W McCamant; Judy E Kim; Richard A Mathies
Vibrational Relaxation in beta-Carotene Probed by Picosecond Stokes and Anti-Stokes Resonance Raman Spectroscopy.
The journal of physical chemistry. A 2002;106(25):6030-8.
2002: Duohai Pan; Ziad Ganim; Judy E Kim; Michiel A Verhoeven; Johan Lugtenburg; Richard A Mathies
Time-resolved resonance Raman analysis of chromophore structural changes in the formation and decay of rhodopsin's BSI intermediate.
Journal of the American Chemical Society 2002;124(17):4857-64.
2002: Elsa C Y Yan; Manija A Kazmi; Soma De; Belinda S W Chang; Christoph Seibert; Ethan P Marin; Richard A Mathies; Thomas P Sakmar
Function of extracellular loop 2 in rhodopsin: glutamic acid 181 modulates stability and absorption wavelength of metarhodopsin II.
Biochemistry 2002;41(11):3620-7.
2002: Igor L Medintz; Lorenzo Berti; Richard A Mathies
Novel energy transfer fluorescence labeling cassette.
BioTechniques 2002;32(2):270, 272.
2002: Brian M Paegel; Charles A Emrich; Gary J Wedemayer; James R Scherer; Richard A Mathies
High throughput DNA sequencing with a microfabricated 96-lane capillary array electrophoresis bioprocessor.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(2):574-9.
2002: Igor Medintz; Wendy W Wong; Richard A Mathies
Fluorescence labeling methods for microchannel plate capillary electrophoresis DNA sizing.
Journal of capillary electrophoresis and microchip technology 2002;7(3-4):43-9.
2001: ET Lagally; Charles A Emrich; Richard A Mathies
Fully integrated PCR-capillary electrophoresis microsystem for DNA analysis.
Lab on a chip 2001;1(2):102-7.
2001: Judy E Kim; Michael J Tauber; Richard A Mathies
Wavelength dependent cis-trans isomerization in vision.
Biochemistry 2001;40(46):13774-8.
2001: J R Scherer; Brian M Paegel; Gary J Wedemayer; Charles A Emrich; J Lo; Igor L Medintz; Richard A Mathies
High-pressure gel loader for capillary array electrophoresis microchannel plates.
BioTechniques 2001;31(5):1150-2, 1154.
2001: Igor L Medintz; Brian M Paegel; Robert G Blazej; Charles A Emrich; Lorenzo Berti; James R Scherer; Richard A Mathies
High-performance genetic analysis using microfabricated capillary array electrophoresis microplates.
Electrophoresis 2001;22(18):3845-56.
2001: Igor L Medintz; Lorenzo Berti; Charles A Emrich; J Tom; James R Scherer; Richard A Mathies
Genotyping energy-transfer-cassette-labeled short-tandem-repeat amplicons with capillary array electrophoresis microchannel plates.
Clinical chemistry 2001;47(9):1614-21.
2001: Igor L Medintz; Brian M Paegel; Richard A Mathies
Microfabricated capillary array electrophoresis DNA analysis systems.
Journal of chromatography. A 2001;924(1-2):265-70.
2001: Duohai Pan; Richard A Mathies
Chromophore structure in lumirhodopsin and metarhodopsin I by time-resolved resonance Raman microchip spectroscopy.
Biochemistry 2001;40(26):7929-36.
2001: Lorenzo Berti; Igor L Medintz; J Tom; Richard A Mathies
Energy-transfer cassette labeling for capillary array electrophoresis short tandem repeat DNA fragment sizing.
Bioconjugate chemistry 2001;12(4):493-500.
2001: Lorenzo Berti; J Xie; Igor L Medintz; Alexander N Glazer; Richard A Mathies
Energy transfer cassettes for facile labeling of sequencing and PCR primers.
Analytical biochemistry 2001;292(2):188-97.
2001: Igor L Medintz; WW Wong; Lorenzo Berti; L Shiow; J Tom; James R Scherer; George F Sensabaugh; Richard A Mathies
High-performance multiplex SNP analysis of three hemochromatosis-related mutations with capillary array electrophoresis microplates.
Genome research 2001;11(3):413-21.
2001: Judy E Kim; David W McCamant; L Zhu; Richard A Mathies
Resonance Raman Structural Evidence that the Cis-to-Trans Isomerization in Rhodopsin Occurs in Femtoseconds.
The journal of physical chemistry. B 2001;105(6):1240-9.
2001: ET Lagally; Igor L Medintz; Richard A Mathies
Single-molecule DNA amplification and analysis in an integrated microfluidic device.
Analytical chemistry 2001;73(3):565-70.
2001: Gary J Wedemayer; Igor L Medintz; W W Wong; J R Scherer; Richard A Mathies
Conversion of capillary electrophoresis microchip genotyping data for analysis with Genetic Profiler software.
BioTechniques 2001;30(1):122-8.
2000: Igor L Medintz; Chyi-Chia Richard Lee; WW Wong; K Pirkola; David Sidransky; Richard A Mathies
Loss of heterozygosity assay for molecular detection of cancer using energy-transfer primers and capillary array electrophoresis.
Genome research 2000;10(8):1211-8.
2000: Brian M Paegel; L D Hutt; PC Simpson; Richard A Mathies
Turn geometry for minimizing band broadening in microfabricated capillary electrophoresis channels.
Analytical chemistry 2000;72(14):3030-7.
2000: Igor L Medintz; WW Wong; George F Sensabaugh; Richard A Mathies
High speed single nucleotide polymorphism typing of a hereditary haemochromatosis mutation with capillary array electrophoresis microplates.
Electrophoresis 2000;21(12):2352-8.
2000: F Andel; JT Murphy; J A Haas; MT McDowell; Ineke van der Hoef; Johan Lugtenburg; J Clark Lagarias; Richard A Mathies
Probing the photoreaction mechanism of phytochrome through analysis of resonance Raman vibrational spectra of recombinant analogues.
Biochemistry 2000;39(10):2667-76.
1999: Y Shi; PC Simpson; James R Scherer; D Wexler; Christine F Skibola; M T Smith; Richard A Mathies
Radial capillary array electrophoresis microplate and scanner for high-performance nucleic acid analysis.
Analytical chemistry 1999;71(23):5354-61.
1999: Brian B Haab; Richard A Mathies
Single-molecule detection of DNA separations in microfabricated capillary electrophoresis chips employing focused molecular streams.
Analytical chemistry 1999;71(22):5137-45.
1999: L D Hutt; Daniel P Glavin; Jeffrey L Bada; Richard A Mathies
Microfabricated capillary electrophoresis amino acid chirality analyzer for extraterrestrial exploration.
Analytical chemistry 1999;71(18):4000-6.
1999: GG Kochendoerfer; SW Lin; Thomas P Sakmar; Richard A Mathies
How color visual pigments are tuned.
Trends in biochemical sciences 1999;24(8):300-5.
1999: James R Scherer; I Kheterpal; A Radhakrishnan; W W Ja; Richard A Mathies
Ultra-high throughput rotary capillary array electrophoresis scanner for fluorescent DNA sequencing and analysis.
Electrophoresis 1999;20(7):1508-17.
1999: S Liu; Y Shi; W W Ja; Richard A Mathies
Optimization of high-speed DNA sequencing on microfabricated capillary electrophoresis channels.
Analytical chemistry 1999;71(3):566-73.
1999: Richard A Mathies
Photons, femtoseconds and dipolar interactions: a molecular picture of the primary events in vision.
Novartis Foundation symposium 1999;224():70-84; discussion 84-101.
1999: I Kheterpal; Richard A Mathies
Capillary array electrophoresis DNA sequencing.
Analytical chemistry 1999;71(1):31A-37A.
1998: SW Lin; GG Kochendoerfer; K S Carroll; D Wang; Richard A Mathies; Thomas P Sakmar
Mechanisms of spectral tuning in blue cone visual pigments. Visible and raman spectroscopy of blue-shifted rhodopsin mutants.
The Journal of biological chemistry 1998;273(38):24583-91.
1998: I Kheterpal; L Li; T P Speed; Richard A Mathies
A three-wavelength labeling approach for DNA sequencing using energy transfer primers and capillary electrophoresis.
Electrophoresis 1998;19(8-9):1403-14.
1998: PC Simpson; D Roach; AT Woolley; T Thorsen; R Johnston; George F Sensabaugh; Richard A Mathies
High-throughput genetic analysis using microfabricated 96-sample capillary array electrophoresis microplates.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(5):2256-61.
1998: AT Woolley; kaiqin lao; Alexander N Glazer; Richard A Mathies
Capillary electrophoresis chips with integrated electrochemical detection.
Analytical chemistry 1998;70(4):684-8.
1998: SC Hung; Richard A Mathies; Alexander N Glazer
Comparison of fluorescence energy transfer primers with different donor-acceptor dye combinations.
Analytical biochemistry 1998;255(1):32-8.
1997: GG Kochendoerfer; S Kaminaka; Richard A Mathies
Ultraviolet resonance Raman examination of the light-induced protein structural changes in rhodopsin activation.
Biochemistry 1997;36(43):13153-9.
1997: Z Zeng; Simon M Clark; Richard A Mathies; Alexander N Glazer
Improved stability and electrophoretic properties of preformed fluorescent cationic dye-DNA complexes in a taps-tetrapentylammonium buffer in agarose slab gels.
Analytical biochemistry 1997;252(1):110-4.
1997: SC Hung; Richard A Mathies; Alexander N Glazer
Optimization of spectroscopic and electrophoretic properties of energy transfer primers.
Analytical biochemistry 1997;252(1):78-88.
1997: Y Wang; SC Hung; J F Linn; G Steiner; Alexander N Glazer; David Sidransky; Richard A Mathies
Microsatellite-based cancer detection using capillary array electrophoresis and energy-transfer fluorescent primers.
Electrophoresis 1997;18(10):1742-9.
1997: N J Cherepy; Andrew P Shreve; L J Moore; Steven G Boxer; Richard A Mathies
Temperature dependence of the Qy resonance Raman spectra of bacteriochlorophylls, the primary electron donor, and bacteriopheophytins in the bacterial photosynthetic reaction center.
Biochemistry 1997;36(28):8559-66.
1997: GG Kochendoerfer; Z Wang; D D Oprian; Richard A Mathies
Resonance Raman examination of the wavelength regulation mechanism in human visual pigments.
Biochemistry 1997;36(22):6577-87.
1997: AT Woolley; George F Sensabaugh; Richard A Mathies
High-speed DNA genotyping using microfabricated capillary array electrophoresis chips.
Analytical chemistry 1997;69(11):2181-6.
1997: S M Clark; Richard A Mathies
Multiplex dsDNA Fragment Sizing Using Dimeric Intercalation Dyes and Capillary Array Electrophoresis: Ionic Effects on the Stability and Electrophoretic Mobility of DNA-Dye Complexes.
Analytical chemistry 1997;69(7):1355-63.
1997: Alexander N Glazer; Richard A Mathies
Energy-transfer fluorescent reagents for DNA analyses.
Current opinion in biotechnology 1997;8(1):94-102.
1996: GG Kochendoerfer; Peter J E Verdegem; I van der Hoef; Johan Lugtenburg; Richard A Mathies
Retinal analog study of the role of steric interactions in the excited state isomerization dynamics of rhodopsin.
Biochemistry 1996;35(50):16230-40.
1996: F Andel; J C Lagarias; Richard A Mathies
Resonance raman analysis of chromophore structure in the lumi-R photoproduct of phytochrome.
Biochemistry 1996;35(50):15997-6008.
1996: I Kheterpal; J R Scherer; S M Clark; A Radhakrishnan; J Ju; C L Ginther; George F Sensabaugh; Richard A Mathies
DNA sequencing using a four-color confocal fluorescence capillary array scanner.
Electrophoresis 1996;17(12):1852-9.
1996: S C Hung; J Ju; Richard A Mathies; Alexander N Glazer
Cyanine dyes with high absorption cross section as donor chromophores in energy transfer primers.
Analytical biochemistry 1996;243(1):15-27.
1996: A T Woolley; D Hadley; P Landre; A J deMello; Richard A Mathies; MA Northrup
Functional integration of PCR amplification and capillary electrophoresis in a microfabricated DNA analysis device.
Analytical chemistry 1996;68(23):4081-6.
1996: Y Wang; J M Wallin; J Ju; George F Sensabaugh; Richard A Mathies
High-resolution capillary array electrophoretic sizing of multiplexed short tandem repeat loci using energy-transfer fluorescent primers.
Electrophoresis 1996;17(9):1485-90.
1996: S C Hung; J Ju; Richard A Mathies; Alexander N Glazer
Energy transfer primers with 5- or 6-carboxyrhodamine-6G as acceptor chromophores.
Analytical biochemistry 1996;238(2):165-70.
1996: J Ju; Alexander N Glazer; Richard A Mathies
Cassette labeling for facile construction of energy transfer fluorescent primers.
Nucleic acids research 1996;24(6):1144-8.
1996: J Ju; Alexander N Glazer; Richard A Mathies
Energy transfer primers: a new fluorescence labeling paradigm for DNA sequencing and analysis.
Nature medicine 1996;2(2):246-9.
1995: A T Woolley; Richard A Mathies
Ultra-high-speed DNA sequencing using capillary electrophoresis chips.
Analytical chemistry 1995;67(20):3676-80.
1995: J Ju; I Kheterpal; J R Scherer; C Ruan; Carl W Fuller; Alexander N Glazer; Richard A Mathies
Design and synthesis of fluorescence energy transfer dye-labeled primers and their application for DNA sequencing and analysis.
Analytical biochemistry 1995;231(1):131-40.
1995: M Kim; Richard A Mathies; W D Hoff; K J Hellingwerf
Resonance Raman evidence that the thioester-linked 4-hydroxycinnamyl chromophore of photoactive yellow protein is deprotonated.
Biochemistry 1995;34(39):12669-72.
1995: Brian B Haab; Richard A Mathies
Single molecule fluorescence burst detection of DNA fragments separated by capillary electrophoresis.
Analytical chemistry 1995;67(18):3253-60.
1995: Richard A Mathies; X Y Li
On modeling the vibrational spectra of 14-s-cis retinal conformers in bacteriorhodopsin.
Biophysical chemistry 1995;56(1-2):47-55.
1995: J Ju; C Ruan; Carl W Fuller; Alexander N Glazer; Richard A Mathies
Fluorescence energy transfer dye-labeled primers for DNA sequencing and analysis.
Proceedings of the National Academy of Sciences of the United States of America 1995;92(10):4347-51.
1995: N J Cherepy; A R Holzwarth; Richard A Mathies
Near-infrared resonance Raman spectra of Chloroflexus aurantiacus photosynthetic reaction centers.
Biochemistry 1995;34(15):5288-93.
1995: Y Wang; J Ju; B A Carpenter; J M Atherton; George F Sensabaugh; Richard A Mathies
Rapid sizing of short tandem repeat alleles using capillary array electrophoresis and energy-transfer fluorescent primers.
Analytical chemistry 1995;67(7):1197-203.
1995: Richard A Mathies
Biomolecular vibrational spectroscopy.
Methods in enzymology 1995;246():377-89.
1994: A T Woolley; Richard A Mathies
Ultra-high-speed DNA fragment separations using microfabricated capillary array electrophoresis chips.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(24):11348-52.
1994: Q Wang; R W Schoenlein; L A Peteanu; Richard A Mathies; C V Shank
Vibrationally coherent photochemistry in the femtosecond primary event of vision.
Science (New York, N.Y.) 1994;266(5184):422-4.
1994: H Zhu; S M Clark; S C Benson; H S Rye; Alexander N Glazer; Richard A Mathies
High-sensitivity capillary electrophoresis of double-stranded DNA fragments using monomeric and dimeric fluorescent intercalating dyes.
Analytical chemistry 1994;66(13):1941-8.
1994: S W Lin; Yasushi Imamoto; Yoshitaka Fukada; Yoshinori Shichida; T Yoshizawa; Richard A Mathies
What makes red visual pigments red? A resonance Raman microprobe study of retinal chromophore structure in iodopsin.
Biochemistry 1994;33(8):2151-60.
1993: L A Peteanu; R W Schoenlein; Q Wang; Richard A Mathies; C V Shank
The first step in vision occurs in femtoseconds: complete blue and red spectral studies.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(24):11762-6.
1993: S C Benson; Richard A Mathies; Alexander N Glazer
Heterodimeric DNA-binding dyes designed for energy transfer: stability and applications of the DNA complexes.
Nucleic acids research 1993;21(24):5720-6.
1993: S M Clark; Richard A Mathies
High-speed parallel separation of DNA restriction fragments using capillary array electrophoresis.
Analytical biochemistry 1993;215(2):163-70.
1993: H S Rye; S Yue; M A Quesada; R P Haugland; Richard A Mathies; Alexander N Glazer
Picogram detection of stable dye-DNA intercalation complexes with two-color laser-excited confocal fluorescence gel scanner.
Methods in enzymology 1993;217():414-31.
1993: H S Rye; J M Dabora; M A Quesada; Richard A Mathies; Alexander N Glazer
Fluorometric assay using dimeric dyes for double- and single-stranded DNA and RNA with picogram sensitivity.
Analytical biochemistry 1993;208(1):144-50.
1992: James B Ames; J Raap; Johan Lugtenburg; Richard A Mathies
Resonance Raman study of halorhodopsin photocycle kinetics, chromophore structure, and chloride-pumping mechanism.
Biochemistry 1992;31(50):12546-54.
1992: X C Huang; M A Quesada; Richard A Mathies
DNA sequencing using capillary array electrophoresis.
Analytical chemistry 1992;64(18):2149-54.
1992: James B Ames; M Ros; J Raap; Johan Lugtenburg; Richard A Mathies
Time-resolved ultraviolet resonance Raman studies of protein structure: application to bacteriorhodopsin.
Biochemistry 1992;31(23):5328-34.
1992: H S Rye; S Yue; David E Wemmer; M A Quesada; R P Haugland; Richard A Mathies; Alexander N Glazer
Stable fluorescent complexes of double-stranded DNA with bis-intercalating asymmetric cyanine dyes: properties and applications.
Nucleic acids research 1992;20(11):2803-12.
1992: S W Lin; Thomas P Sakmar; R R Franke; H Gobind Khorana; Richard A Mathies
Resonance Raman microprobe spectroscopy of rhodopsin mutants: effect of substitutions in the third transmembrane helix.
Biochemistry 1992;31(22):5105-11.
1992: W T Pollard; Richard A Mathies
Analysis of femtosecond dynamic absorption spectra of nonstationary states.
Annual review of physical chemistry 1992;43():497-523.
1991: A P Shreve; N J Cherepy; S Franzen; Steven G Boxer; Richard A Mathies
Rapid-flow resonance Raman spectroscopy of bacterial photosynthetic reaction centers.
Proceedings of the National Academy of Sciences of the United States of America 1991;88(24):11207-11.
1991: R W Schoenlein; L A Peteanu; Richard A Mathies; C V Shank
The first step in vision: femtosecond isomerization of rhodopsin.
Science (New York, N.Y.) 1991;254(5030):412-5.
1991: M A Quesada; H S Rye; J C Gingrich; Alexander N Glazer; Richard A Mathies
High-sensitivity DNA detection with a laser-excited confocal fluorescence gel scanner.
BioTechniques 1991;10(5):616-25.
1991: S W Lin; S P Fodor; Larry J W Miercke; R F Shand; M C Betlach; Robert M Stroud; Richard A Mathies
Resonance Raman spectra of bacteriorhodopsin mutants with substitutions at Asp-85, Asp-96, and Arg-82.
Photochemistry and photobiology 1991;53(3):341-6.
1991: H S Rye; M A Quesada; K Peck; Richard A Mathies; Alexander N Glazer
High-sensitivity two-color detection of double-stranded DNA with a confocal fluorescence gel scanner using ethidium homodimer and thiazole orange.
Nucleic acids research 1991;19(2):327-33.
1991: Richard A Mathies; S W Lin; James B Ames; W T Pollard
From femtoseconds to biology: mechanism of bacteriorhodopsin's light-driven proton pump.
Annual review of biophysics and biophysical chemistry 1991;20():491-518.
1990: S P Fodor; J C Lagarias; Richard A Mathies
Resonance Raman analysis of the Pr and Pfr forms of phytochrome.
Biochemistry 1990;29(50):11141-6.
1990: G R Loppnow; M E Miley; Richard A Mathies; R S Liu; H Kandori; Yoshinori Shichida; Yoshitaka Fukada; T Yoshizawa
Structure of the retinal chromophore in 7,9-dicis-rhodopsin.
Biochemistry 1990;29(38):8985-91.
1990: Steven O Smith; I Palings; M E Miley; J Courtin; H de Groot; Johan Lugtenburg; Richard A Mathies; Robert G Griffin
Solid-state NMR studies of the mechanism of the opsin shift in the visual pigment rhodopsin.
Biochemistry 1990;29(35):8158-64.
1990: M M Netto; S P Fodor; Richard A Mathies
Ultraviolet resonance Raman spectroscopy of bacteriorhodopsin.
Photochemistry and photobiology 1990;52(3):605-7.
1990: Richard A Mathies; K Peck; L Stryer
Optimization of high-sensitivity fluorescence detection.
Analytical chemistry 1990;62(17):1786-91.
1990: James B Ames; Richard A Mathies
The role of back-reactions and proton uptake during the N----O transition in bacteriorhodopsin's photocycle: a kinetic resonance Raman study.
Biochemistry 1990;29(31):7181-90.
1990: Clint L Makino; Timothy W Kraft; Richard A Mathies; Johan Lugtenburg; M E Miley; R van der Steen; Denis A Baylor
Effects of modified chromophores on the spectral sensitivity of salamander, squirrel and macaque cones.
The Journal of physiology 1990;424():545-60.
1990: Alexander N Glazer; K Peck; Richard A Mathies
A stable double-stranded DNA-ethidium homodimer complex: application to picogram fluorescence detection of DNA in agarose gels.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(10):3851-5.
1990: Timothy W Kraft; Clint L Makino; Richard A Mathies; Johan Lugtenburg; J L Schnapf; Denis A Baylor
Cone excitations and color vision.
Cold Spring Harbor symposia on quantitative biology 1990;55():635-41.
1989: S P Fodor; R Gebhard; Johan Lugtenburg; R A Bogomolni; Richard A Mathies
Structure of the retinal chromophore in sensory rhodopsin I from resonance Raman spectroscopy.
The Journal of biological chemistry 1989;264(31):18280-3.
1989: S W Lin; Richard A Mathies
Orientation of the protonated retinal Schiff base group in bacteriorhodopsin from absorption linear dichroism.
Biophysical journal 1989;56(4):653-60.
1989: K Peck; L Stryer; Alexander N Glazer; Richard A Mathies
Single-molecule fluorescence detection: autocorrelation criterion and experimental realization with phycoerythrin.
Proceedings of the National Academy of Sciences of the United States of America 1989;86(11):4087-91.
1989: James B Ames; S P Fodor; R Gebhard; J Raap; E M van den Berg; Johan Lugtenburg; Richard A Mathies
Bacteriorhodopsin's M412 intermediate contains a 13-cis, 14-s-trans, 15-anti-retinal Schiff base chromophore.
Biochemistry 1989;28(9):3681-7.
1989: G R Loppnow; B A Barry; Richard A Mathies
Why are blue visual pigments blue? A resonance Raman microprobe study.
Proceedings of the National Academy of Sciences of the United States of America 1989;86(5):1515-8.
1989: I Palings; E M van den Berg; Johan Lugtenburg; Richard A Mathies
Complete assignment of the hydrogen out-of-plane wagging vibrations of bathorhodopsin: chromophore structure and energy storage in the primary photoproduct of vision.
Biochemistry 1989;28(4):1498-507.
1989: D R Baselt; S P Fodor; R van der Steen; Johan Lugtenburg; R A Bogomolni; Richard A Mathies
Halorhodopsin and sensory rhodopsin contain a C6-C7 s-trans retinal chromophore.
Biophysical journal 1989;55(1):193-6.
1988: J Lugtenburg; Richard A Mathies; R G Griffin; J Herzfeld
Structure and function of rhodopsins from solid state NMR and resonance Raman spectroscopy of isotopic retinal derivatives.
Trends in biochemical sciences 1988;13(10):388-93.
1988: S P Fodor; James B Ames; R Gebhard; E M van den Berg; W Stoeckenius; Johan Lugtenburg; Richard A Mathies
Chromophore structure in bacteriorhodopsin's N intermediate: implications for the proton-pumping mechanism.
Biochemistry 1988;27(18):7097-101.
1988: S P Fodor; J C Lagarias; Richard A Mathies
Resonance Raman spectra of the Pr-form of phytochrome.
Photochemistry and photobiology 1988;48(2):129-36.
1988: G R Loppnow; Richard A Mathies
Excited-state structure and isomerization dynamics of the retinal chromophore in rhodopsin from resonance Raman intensities.
Biophysical journal 1988;54(1):35-43.
1988: Richard A Mathies; Carlos Cruz; W T Pollard; C V Shank
Direct observation of the femtosecond excited-state cis-trans isomerization in bacteriorhodopsin.
Science (New York, N.Y.) 1988;240(4853):777-9.
1988: S P Fodor; W T Pollard; R Gebhard; E M van den Berg; Johan Lugtenburg; Richard A Mathies
Bacteriorhodopsin's L550 intermediate contains a C14-C15 s-trans-retinal chromophore.
Proceedings of the National Academy of Sciences of the United States of America 1988;85(7):2156-60.
1987: M O Trulson; P Cruz; Joseph D Puglisi; Ignacio Tinoco; Richard A Mathies
Raman spectroscopic study of left-handed Z-RNA.
Biochemistry 1987;26(26):8624-30.
1987: S P Fodor; R A Bogomolni; Richard A Mathies
Structure of the retinal chromophore in the hRL intermediate of halorhodopsin from resonance raman spectroscopy.
Biochemistry 1987;26(21):6775-8.
1987: B Barry; Richard A Mathies; J A Pardoen; Johan Lugtenburg
Raman microscope and quantum yield studies on the primary photochemistry of A2-visual pigments.
Biophysical journal 1987;52(4):603-10.
1987: I Palings; J A Pardoen; E van den Berg; C Winkel; Johan Lugtenburg; Richard A Mathies
Assignment of fingerprint vibrations in the resonance Raman spectra of rhodopsin, isorhodopsin, and bathorhodopsin: implications for chromophore structure and environment.
Biochemistry 1987;26(9):2544-56.
1987: Steven O Smith; I Palings; Valerie Copie; D P Raleigh; J Courtin; J A Pardoen; Johan Lugtenburg; Richard A Mathies; Robert G Griffin
Low-temperature solid-state 13C NMR studies of the retinal chromophore in rhodopsin.
Biochemistry 1987;26(6):1606-11.
1987: B Barry; Richard A Mathies
Raman microscope studies on the primary photochemistry of vertebrate visual pigments with absorption maxima from 430 to 502 nm.
Biochemistry 1987;26(1):59-64.
1986: Steven O Smith; I Hornung; R van der Steen; J A Pardoen; M S Braiman; Johan Lugtenburg; Richard A Mathies
Are C14-C15 single bond isomerizations of the retinal chromophore involved in the proton-pumping mechanism of bacteriorhodopsin?
Proceedings of the National Academy of Sciences of the United States of America 1986;83(4):967-71.
1985: G S Harbison; Steven O Smith; J A Pardoen; J M Courtin; Johan Lugtenburg; Judith Herzfeld; Richard A Mathies; Robert G Griffin
Solid-state 13C NMR detection of a perturbed 6-s-trans chromophore in bacteriorhodopsin.
Biochemistry 1985;24(24):6955-62.
1985: Steven O Smith; A B Myers; Richard A Mathies; J A Pardoen; C Winkel; E M van den Berg; Johan Lugtenburg
Vibrational analysis of the all-trans retinal protonated Schiff base.
Biophysical journal 1985;47(5):653-64.
1985: S O Smith; Richard A Mathies
Resonance Raman spectra of the acidified and deionized forms of bacteriorhodopsin.
Biophysical journal 1985;47(2 Pt 1):251-4.
1985: S O Smith; J Lugtenburg; Richard A Mathies
Determination of retinal chromophore structure in bacteriorhodopsin with resonance Raman spectroscopy.
The Journal of membrane biology 1985;85(2):95-109.
1984: S O Smith; M J Marvin; R A Bogomolni; Richard A Mathies
Structure of the retinal chromophore in the hR578 form of halorhodopsin.
The Journal of biological chemistry 1984;259(20):12326-9.
1984: G S Harbison; Steven O Smith; J A Pardoen; P P Mulder; Johan Lugtenburg; Judith Herzfeld; Richard A Mathies; Robert G Griffin
Solid-state 13C NMR studies of retinal in bacteriorhodopsin.
Biochemistry 1984;23(12):2662-7.
1984: S O Smith; A B Myers; J A Pardoen; C Winkel; P P Mulder; Johan Lugtenburg; Richard A Mathies
Determination of retinal Schiff base configuration in bacteriorhodopsin.
Proceedings of the National Academy of Sciences of the United States of America 1984;81(7):2055-9.
1984: G S Harbison; Steven O Smith; J A Pardoen; C Winkel; Johan Lugtenburg; Judith Herzfeld; Richard A Mathies; Robert G Griffin
Dark-adapted bacteriorhodopsin contains 13-cis, 15-syn and all-trans, 15-anti retinal Schiff bases.
Proceedings of the National Academy of Sciences of the United States of America 1984;81(6):1706-9.
1980: G Eyring; B Curry; Richard A Mathies; R Fransen; I Palings; Johan Lugtenburg
Interpretation of the resonance Raman spectrum of bathorhodopsin based on visual pigment analogues.
Biochemistry 1980;19(11):2410-8.