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Pedro Matias

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Susana Gonçalves; Maria A Carrondo; Anthony M Dean; Stephen P Miller; Pedro M Matias
Induced fit and the catalytic mechanism of isocitrate dehydrogenase.
Sabine Gorynia; Pedro M Matias; Colin E McVey; Filipa G Pinho; Adam Round; Dmitri I Svergun; Clemens Vonrhein; Tiago M Bandeiras; Peter Donner; Maria Arménia Carrondo
Structural and functional insights into a dodecameric molecular machine - the RuvBL1/RuvBL2 complex.
Susana Gonçalves; Nuno Borges; Ana M Esteves; Helena Santos; Pedro M Matias
Three-dimensional structure of mannosyl-3-phosphoglycerate phosphatase from Thermus thermophilus HB27: a new member of the haloalcanoic acid dehalogenase superfamily.

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All Publications

2012: Susana Gonçalves; Maria A Carrondo; Anthony M Dean; Stephen P Miller; Pedro M Matias
Induced fit and the catalytic mechanism of isocitrate dehydrogenase.
Biochemistry 2012;51(36):7098-115.
2011: Sabine Gorynia; Pedro M Matias; Colin E McVey; Filipa G Pinho; Adam Round; Dmitri I Svergun; Clemens Vonrhein; Tiago M Bandeiras; Peter Donner; Maria Arménia Carrondo
Structural and functional insights into a dodecameric molecular machine - the RuvBL1/RuvBL2 complex.
Journal of structural biology 2011;176(3):279-91.
2011: Susana Gonçalves; Nuno Borges; Ana M Esteves; Helena Santos; Pedro M Matias
Three-dimensional structure of mannosyl-3-phosphoglycerate phosphatase from Thermus thermophilus HB27: a new member of the haloalcanoic acid dehalogenase superfamily.
Biochemistry 2011;50(44):9551-67.
2011: Filipa G Pinho; Ana F Pinto; Liliana C Pinto; Harald Huber; Célia V Romão; Miguel Teixeira; Pedro M Matias; Tiago M Bandeiras
Superoxide reductase from Nanoarchaeum equitans: expression, purification, crystallization and preliminary X-ray crystallographic analysis.
Acta crystallographica. Section F, Structural biology and crystallization communications 2011;67(Pt 5):591-5.
2011: Susana Gonçalves; Ana M Esteves; Nuno Borges; Helena Santos; Pedro M Matias
Crystallization and preliminary X-ray analysis of mannosyl-3-phosphoglycerate phosphatase from Thermus thermophilus HB27.
Acta crystallographica. Section F, Structural biology and crystallization communications 2011;67(Pt 3):390-6.
2011: Célia V Romão; Dimitrios Ladakis; Susana A L Lobo; Maria Arménia Carrondo; Amanda A Brindley; Evelyne Deery; Pedro M Matias; Richard W Pickersgill; Lígia M Saraiva; Martin J Warren
Evolution in a family of chelatases facilitated by the introduction of active site asymmetry and protein oligomerization.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(1):97-102.
2010: Susana Gonçalves; Nuno Borges; Ana M Esteves; Bruno L Victor; Cláudio M Soares; Helena Santos; Pedro M Matias
Structural analysis of Thermus thermophilus HB27 mannosyl-3-phosphoglycerate synthase provides evidence for a second catalytic metal ion and new insight into the retaining mechanism of glycosyltransferases.
The Journal of biological chemistry 2010;285(23):17857-68.
2010: Marta C Marques; Ricardo Coelho; Antonio L De Lacey; Inês A C Pereira; Pedro M Matias
The three-dimensional structure of [NiFeSe] hydrogenase from Desulfovibrio vulgaris Hildenborough: a hydrogenase without a bridging ligand in the active site in its oxidised, "as-isolated" state.
Journal of molecular biology 2010;396(4):893-907.
2010: Tiago M Bandeiras; Célia V Romão; João Rodrigues; Miguel Teixeira; Pedro M Matias
Purification, crystallization and X-ray crystallographic analysis of Archaeoglobus fulgidus neelaredoxin.
Acta crystallographica. Section F, Structural biology and crystallization communications 2010;66(Pt 3):316-9.
2009: Susana Gonçalves; Nuno Borges; Helena Santos; Pedro M Matias
Crystallization and preliminary X-ray analysis of mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27.
Acta crystallographica. Section F, Structural biology and crystallization communications 2009;65(Pt 10):1014-7.
2009: Marta Marques; Ricardo Coelho; Inês A C Pereira; Pedro M Matias
Purification, crystallization and preliminary crystallographic analysis of the [NiFeSe] hydrogenase from Desulfovibrio vulgaris Hildenborough.
Acta crystallographica. Section F, Structural biology and crystallization communications 2009;65(Pt 9):920-2.
2008: Tânia F Oliveira; Clemens Vonrhein; Pedro M Matias; Sofia S Venceslau; Inês A C Pereira; Margarida Archer
The crystal structure of Desulfovibrio vulgaris dissimilatory sulfite reductase bound to DsrC provides novel insights into the mechanism of sulfate respiration.
The Journal of biological chemistry 2008;283(49):34141-9.
2008: Tânia F Oliveira; Clemens Vonrhein; Pedro M Matias; Sofia S Venceslau; Inês A C Pereira; Margarida Archer
Purification, crystallization and preliminary crystallographic analysis of a dissimilatory DsrAB sulfite reductase in complex with DsrC.
Journal of structural biology 2008;164(2):236-9.
2008: Sabine Gorynia; Pedro M Matias; Tiago M Bandeiras; Peter Donner; Maria Arménia Carrondo
Cloning, expression, purification, crystallization and preliminary X-ray analysis of the human RuvBL1-RuvBL2 complex.
Acta crystallographica. Section F, Structural biology and crystallization communications 2008;64(Pt 9):840-6.
2007: Jana Tatur; Wilfred R Hagen; Pedro M Matias
Crystal structure of the ferritin from the hyperthermophilic archaeal anaerobe Pyrococcus furiosus.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2007;12(5):615-30.
2007: Maria Arménia Carrondo; Isabel Bento; Pedro M Matias; Peter F Lindley
Crystallographic evidence for dioxygen interactions with iron proteins.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2007;12(4):429-42.
2006: Pedro M Matias; Sabine Gorynia; Peter Donner; Maria Arménia Carrondo
Crystal structure of the human AAA+ protein RuvBL1.
The Journal of biological chemistry 2006;281(50):38918-29.
2006: Maria Luisa Rodrigues; Tânia F Oliveira; Pedro M Matias; I C Martins; Filipa M A Valente; Inês A C Pereira; Margarida Archer
Crystallization and preliminary structure determination of the membrane-bound complex cytochrome c nitrite reductase from Desulfovibrio vulgaris Hildenborough.
Acta crystallographica. Section F, Structural biology and crystallization communications 2006;62(Pt 6):565-8.
2006: Sabine Gorynia; Pedro M Matias; Susana Gonçalves; Ricardo Coelho; Gonçalo Lopes; Mónica Thomaz; Martina Huber; Bernard Haendler; Peter Donner; Maria Arménia Carrondo
Expression, purification, crystallization and preliminary X-ray analysis of the human RuvB-like protein RuvBL1.
Acta crystallographica. Section F, Structural biology and crystallization communications 2006;62(Pt 1):61-6.
2005: Pedro M Matias; Inês A C Pereira; Cláudio M Soares; Maria Arménia Carrondo
Sulphate respiration from hydrogen in Desulfovibrio bacteria: a structural biology overview.
Progress in biophysics and molecular biology 2005;89(3):292-329.
2005: Pedro M Matias; Jana Tatur; Maria Arménia Carrondo; Wilfred R Hagen
Crystallization and preliminary X-ray characterization of a ferritin from the hyperthermophilic archaeon and anaerobe Pyrococcus furiosus.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 5):503-6.
2004: Isabel Bento; Pedro M Matias; António M Baptista; Patrícía N da Costa; Walter M A M van Dongen; Lígia M Saraiva; Thomas R Schneider; Cláudio M Soares; Maria Arménia Carrondo
Molecular basis for redox-Bohr and cooperative effects in cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774: crystallographic and modeling studies of oxidized and reduced high-resolution structures at pH 7.6.
Proteins 2004;54(1):135-52.
2003: Isabel Bento; Vitor H Teixeira; António M Baptista; Cláudio M Soares; Pedro M Matias; Maria Arménia Carrondo
Redox-Bohr and other cooperativity effects in the nine-heme cytochrome C from Desulfovibrio desulfuricans ATCC 27774: crystallographic and modeling studies.
The Journal of biological chemistry 2003;278(38):36455-69.
2003: Sofia Macedo; Célia V Romão; Edward Mitchell; Pedro M Matias; Ming Y Liu; António V Xavier; Jean Legall; Miguel Teixeira; Peter F Lindley; Maria Arménia Carrondo
The nature of the di-iron site in the bacterioferritin from Desulfovibrio desulfuricans.
Nature structural biology 2003;10(4):285-90.
2003: Isabel A Abreu; Alexandra I Lourenço; António V Xavier; Jean Legall; Ana V Coelho; Pedro M Matias; David M Pinto; Maria Arménia Carrondo; Miguel Teixeira; Lígia M Saraiva
A novel iron centre in the split-Soret cytochrome c from Desulfovibrio desulfuricans ATCC 27774.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2003;8(3):360-70.
2002: Pedro M Matias; Ana V Coelho; Filipa M A Valente; Diana Plácido; Jean Legall; António V Xavier; Inês A C Pereira; Maria Arménia Carrondo
Sulfate respiration in Desulfovibrio vulgaris Hildenborough. Structure of the 16-heme cytochrome c HmcA AT 2.5-A resolution and a view of its role in transmembrane electron transfer.
The Journal of biological chemistry 2002;277(49):47907-16.
2002: Maria João Bonifácio; Margarida Archer; Maria Luisa Rodrigues; Pedro M Matias; David A Learmonth; Maria Arménia Carrondo; Patrício Soares-da-Silva
Kinetics and crystal structure of catechol-o-methyltransferase complex with co-substrate and a novel inhibitor with potential therapeutic application.
Molecular pharmacology 2002;62(4):795-805.
2002: Francisco Enguita; Pedro M Matias; Lígia O. Martins; Diana Plácido; Adriano O Henriques; Maria Arménia Carrondo
Spore-coat laccase CotA from Bacillus subtilis: crystallization and preliminary X-ray characterization by the MAD method.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 9):1490-3.
2002: Pedro M Matias; Maria Arménia Carrondo; Ricardo Coelho; Mónica Thomaz; Xiao-Yan Zhao; Anja Wegg; Kerstin Crusius; Ursula Egner; Peter Donner
Structural basis for the glucocorticoid response in a mutant human androgen receptor (AR(ccr)) derived from an androgen-independent prostate cancer.
Journal of medicinal chemistry 2002;45(7):1439-46.
2001: Ricardo Louro; Isabel Bento; Pedro M Matias; Teresa Catarino; António M Baptista; Cláudio M Soares; Maria Arménia Carrondo; David L Turner; António V Xavier
Conformational component in the coupled transfer of multiple electrons and protons in a monomeric tetraheme cytochrome.
The Journal of biological chemistry 2001;276(47):44044-51.
2001: David A Learmonth; Jan Benes; António Parada; D Hainzl; A Beliaev; Maria João Bonifácio; Pedro M Matias; M A Carrondo; J Garrett; Patrício Soares-da-Silva
Synthesis, anticonvulsant properties and pharmacokinetic profile of novel 10,11-dihydro-10-oxo-5H-dibenz/b,f/azepine-5-carboxamide derivatives.
European journal of medicinal chemistry 2001;36(3):227-36.
2001: Ana V Coelho; Sofia Macedo; Pedro M Matias; A W Thompson ; Jean Legall; Maria Arménia Carrondo
Structure determination of bacterioferritin from Desulfovibrio desulfuricans by the MAD method at the Fe K-edge.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 2):326-9.
2001: Pedro M Matias; Cláudio M Soares; Lígia M Saraiva; Ricardo Coelho; J Morais; J Le Gall; Maria Arménia Carrondo
[NiFe] hydrogenase from Desulfovibrio desulfuricans ATCC 27774: gene sequencing, three-dimensional structure determination and refinement at 1.8 A and modelling studies of its interaction with the tetrahaem cytochrome c3.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2001;6(1):63-81.
2000: Carlos Frazão; G Silva; Cláudio M. Gomes; Pedro M Matias; Ricardo Coelho; Larry Sieker; Sofia Macedo; Ming Y Liu; Solange Oliveira; Miguel Teixeira; António V Xavier; Claudina Rodrigues-Pousada; Maria Arménia Carrondo; J Le Gall
Structure of a dioxygen reduction enzyme from Desulfovibrio gigas.
Nature structural biology 2000;7(11):1041-5.
2000: Pedro M Matias; Peter Donner; Ricardo Coelho; Mónica Thomaz; CM Peixoto; Sofia Macedo; N Otto; S Joschko; P Scholz; A Wegg; S Bäsler; M Schäfer; Ursula Egner; Maria Arménia Carrondo
Structural evidence for ligand specificity in the binding domain of the human androgen receptor. Implications for pathogenic gene mutations.
The Journal of biological chemistry 2000;275(34):26164-71.
1999: Pedro M Matias; Lígia M Saraiva; Cláudio M Soares; Ana V Coelho; Jean Legall; Maria Arménia Carrondo
Nine-haem cytochrome c from Desulfovibrio desulfuricans ATCC 27774:primary sequence determination, crystallographic refinement at 1.8 and modelling studies of its interaction with the tetrahaem cytochrome c3.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 1999;4(4):478-94.
1999: Pedro M Matias; Ricardo Coelho; Inês A C Pereira; Ana V Coelho; A W Thompson; Larry Sieker; J L Gall; Maria Arménia Carrondo
The primary and three-dimensional structures of a nine-haem cytochrome c from Desulfovibrio desulfuricans ATCC 27774 reveal a new member of the Hmc family.
Structure (London, England : 1993) 1999;7(2):119-30.
1996: Ana V Coelho; Pedro M Matias; Larry Sieker; J Morais; Maria Arménia Carrondo; J Lampreia; C Costa; José J G Moura; Isabel Moura; J Le Gall
Preliminary crystallographic analysis and further characterization of a dodecaheme cytochrome c from Desulfovibrio desulfuricans ATCC 27774.
Acta crystallographica. Section D, Biological crystallography 1996;52(Pt 6):1202-8.
1996: Pedro M Matias; J Morais; Ricardo Coelho; Maria Arménia Carrondo; K Wilson; Z Dauter; Larry Sieker
Cytochrome c3 from Desulfovibrio gigas: crystal structure at 1.8 A resolution and evidence for a specific calcium-binding site.
Protein science : a publication of the Protein Society 1996;5(7):1342-54.
1996: Ana V Coelho; Pedro M Matias; Maria Arménia Carrondo; Pedro Tavares; José J G Moura; Isabel Moura; V Fülop; J Hajdu; J Le Gall
Preliminary crystallographic analysis of the oxidized form of a two mono-nuclear iron centres protein from Desulfovibrio desulfuricans ATCC 27774.
Protein science : a publication of the Protein Society 1996;5(6):1189-91.
1995: Carlos Frazão; Joao Dias; Pedro M Matias; Maria João Romão; Maria Arménia Carrondo; Manuel Hervás; José A Navarro; M de la Rosa; George M Sheldrick
Cytochrome c6 from the green alga Monoraphidium braunii. Crystallization and preminary diffraction studies.
Acta crystallographica. Section D, Biological crystallography 1995;51(Pt 2):232-4.
1994: Carlos Frazão; J Morais; Pedro M Matias; Maria Arménia Carrondo
Crystallization and preliminary X-ray diffraction analysis of tetra-heme cytochrome c3 from sulfate- and nitrate-reducing Desulfovibrio desulfuricans ATCC 27774.
Acta crystallographica. Section D, Biological crystallography 1994;50(Pt 2):233-6.
1993: Pedro M Matias; Carlos Frazão; J Morais; Miquel Coll; Maria Arménia Carrondo
Structure analysis of cytochrome c3 from Desulfovibrio vulgaris Hildenborough at 1.9 A resolution.
Journal of molecular biology 1993;234(3):680-99.