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Lauren McIntyre

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Oligonucleotide Array Sequence Analysis

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Kurt Jensen; Swati Khare; Krishanu Mathur; Lauren M McIntyre; Diego E Rincon-Limas; Jonatan Sanchez-Garcia; Caroline Williams; Rita M Graze; Daniel A Hahn; Pedro Fernandez-Funez
Purification of transcripts and metabolites from Drosophila heads.
Artyom Kopp; Lauren M McIntyre
Transcriptional network structure has little effect on the rate of regulatory evolution in yeast.
Denise M Tieman; Esther van der Knaap; Linda M Bartoshuk; Dawn Bies; Adilia Blandon-Ubeda; Peter Bliss; David G Clark; Thomas Colquhoun; Charles Goulet; Melissa H Mageroy; Lauren M McIntyre; Howard Moskowitz; Asli Z Odabasi; Gustavo R Rodríguez; Charles Sims; Derek J Snyder; Mark G Taylor; Harry J Klee
The chemical interactions underlying tomato flavor preferences.

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All Publications

2013: Kurt Jensen; Swati Khare; Krishanu Mathur; Lauren M McIntyre; Diego E Rincon-Limas; Jonatan Sanchez-Garcia; Caroline Williams; Rita M Graze; Daniel A Hahn; Pedro Fernandez-Funez
Purification of transcripts and metabolites from Drosophila heads.
Journal of visualized experiments : JoVE 2013;(73):e50245.
2012: Artyom Kopp; Lauren M McIntyre
Transcriptional network structure has little effect on the rate of regulatory evolution in yeast.
Molecular biology and evolution 2012;29(8):1899-905.
2012: Denise M Tieman; Esther van der Knaap; Linda M Bartoshuk; Dawn Bies; Adilia Blandon-Ubeda; Peter Bliss; David G Clark; Thomas Colquhoun; Charles Goulet; Melissa H Mageroy; Lauren M McIntyre; Howard Moskowitz; Asli Z Odabasi; Gustavo R Rodríguez; Charles Sims; Derek J Snyder; Mark G Taylor; Harry J Klee
The chemical interactions underlying tomato flavor preferences.
Current biology : CB 2012;22(11):1035-9.
2012: R M Graze; V Amin; George Casella; J M Fear; L L Novelo; Sergey V Nuzhdin; Lauren M McIntyre
Allelic imbalance in Drosophila hybrid heads: exons, isoforms, and evolution.
Molecular biology and evolution 2012;29(6):1521-32.
2012: Lauren M McIntyre; Dirk Jan de Koning
Facilitating discovery: the role of Society Journals in collaborative science.
Genetics 2012;190(2):285-6.
2012: Irina Haecker; Jianhong Hu; Lauren M McIntyre; Alison M Morse; Lauren A Gay; Yajie Yang; Rolf Renne
Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas.
PLoS pathogens 2012;8(8):e1002884.
2011: Yajie Yang; Sergey V Nuzhdin; Brandon M Walts; Marta L Wayne; Henry V Baker; Rita M Graze; Cecilia M Lopez; Lauren M McIntyre
Partitioning transcript variation in Drosophila: abundance, isoforms, and alleles.
G3 (Bethesda, Md.) 2011;1(6):427-36.
2011: Marta L Wayne; Jason Pienaar; Marina Telonis-Scott; Lyvie-Sara Sylvestre; Sergey V Nuzhdin; Lauren M McIntyre
Expression of defense genes in Drosophila evolves under a different selective regime from expression of other genes.
Evolution; international journal of organic evolution 2011;65(4):1068-78.
2011: Peng Xu; Lauren M McIntyre; Julie Scardina; Paul A Wheeler; Gary H Thorgaard; Krista M Nichols
Transcriptome profiling of embryonic development rate in rainbow trout advanced backcross introgression lines.
Marine biotechnology (New York, N.Y.) 2011;13(2):215-31.
2011: Lauren M McIntyre; Alison M Morse; Victor Amin; Kenneth K Lopiano; Ann L Oberg; Linda J Young; Sergey V Nuzhdin
RNA-seq: technical variability and sampling.
BMC genomics 2011;12():293.
2010: Martin Gonzalo; J B Holland; Tony J Vyn; Lauren M McIntyre
Direct mapping of density response in a population of B73 x Mo17 recombinant inbred lines of maize (Zea Mays L.).
Heredity 2010;104(6):583-99.
2010: Wilfred Vermerris; Debra M Sherman; Lauren M McIntyre
Phenotypic plasticity in cell walls of maize brown midrib mutants is limited by lignin composition.
Journal of experimental botany 2010;61(9):2479-90.
2010: Paul A Gulig; Valérie de Crécy-Lagard; Anita C Wright; Brandon Walts; Marina Telonis-Scott; Lauren M McIntyre
SOLiD sequencing of four Vibrio vulnificus genomes enables comparative genomic analysis and identification of candidate clade-specific virulence genes.
BMC genomics 2010;11():512.
2009: Rita M Graze; Lauren M McIntyre; Bradley J Main; Marta L Wayne; Sergey V Nuzhdin
Regulatory divergence in Drosophila melanogaster and D. simulans, a genomewide analysis of allele-specific expression.
Genetics 2009;183(2):547-61, 1SI-21SI.
2009: Marina Telonis-Scott; Artyom Kopp; Marta L Wayne; Sergey V Nuzhdin; Lauren M McIntyre
Sex-specific splicing in Drosophila: widespread occurrence, tissue specificity and evolutionary conservation.
Genetics 2009;181(2):421-34.
2008: Artyom Kopp; Olga Barmina; Andrew M Hamilton; Laura Higgins; Lauren M McIntyre; Corbin D Jones
Evolution of gene expression in the Drosophila olfactory system.
Molecular biology and evolution 2008;25(6):1081-92.
2008: Anne Genissel; Lauren M McIntyre; Marta L Wayne; Sergey V Nuzhdin
Cis and trans regulatory effects contribute to natural variation in transcriptome of Drosophila melanogaster.
Molecular biology and evolution 2008;25(1):101-10.
2008: Raymond W M Fung; Martin Gonzalo; Csaba Fekete; Laszlo G Kovacs; Yan He; Ellen Marsh; Lauren M McIntyre; Daniel P Schachtman; Wenping Qiu
Powdery mildew induces defense-oriented reprogramming of the transcriptome in a susceptible but not in a resistant grapevine.
Plant physiology 2008;146(1):236-49.
2007: Marta L Wayne; Marina Telonis-Scott; Lisa M Bono; Lawrence G Harshman; Artyom Kopp; Sergey V Nuzhdin; Lauren M McIntyre
Simpler mode of inheritance of transcriptional variation in male Drosophila melanogaster.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(47):18577-82.
2007: Vance G Fowler; Charlotte L Nelson; Lauren M McIntyre; Barry N Kreiswirth; Alastair B Monk; Gordon L Archer; Jerome Federspiel; Steven Naidich; Brian Remortel; Thomas H Rude; Pamela Brown; L Barth Reller; G Ralph Corey; Steven R Gill
Potential associations between hematogenous complications and bacterial genotype in Staphylococcus aureus infection.
The Journal of infectious diseases 2007;196(5):738-47.
2007: Martin Gonzalo; Tony J Vyn; J B Holland; Lauren M McIntyre
Mapping reciprocal effects and interactions with plant density stress in Zea mays L.
Heredity 2007;99(1):14-30.
2006: Martin Gonzalo; Tony J Vyn; James B Holland; Lauren M McIntyre
Mapping density response in maize: a direct approach for testing genotype and treatment interactions.
Genetics 2006;173(1):331-48.
2006: Koen J F Verhoeven; J-L Jannink; Lauren M McIntyre
Using mating designs to uncover QTL and the genetic architecture of complex traits.
Heredity 2006;96(2):139-49.
2006: Lauren M McIntyre; Lisa M Bono; Anne Genissel; Rick Westerman; Damion Junk; Marina Telonis-Scott; Lawrence G Harshman; Marta L Wayne; Artyom Kopp; Sergey V Nuzhdin
Sex-specific expression of alternative transcripts in Drosophila.
Genome biology 2006;7(8):R79.
2005: Olga Barmina; Martin Gonzalo; Lauren M McIntyre; Artyom Kopp
Sex- and segment-specific modulation of gene expression profiles in Drosophila.
Developmental biology 2005;288(2):528-44.
2005: Marina Telonis-Scott; Lauren M McIntyre; Marta L Wayne
Genetic architecture of two fitness-related traits in Drosophila melanogaster: ovariole number and thorax length.
Genetica 2005;125(2-3):211-22.
2005: Cynthia J Coffman; Rebecca W Doerge; Katy L Simonsen; Krista M Nichols; Christine W Duarte; Russell D Wolfinger; Lauren M McIntyre
Model selection in binary trait locus mapping.
Genetics 2005;170(3):1281-97.
2005: Cynthia J Coffman; Marta L Wayne; Sergey V Nuzhdin; Laura A Higgins; Lauren M McIntyre
Identification of co-regulated transcripts affecting male body size in Drosophila.
Genome biology 2005;6(6):R53.
2004: Marta L Wayne; Y-J Pan; Sergey V Nuzhdin; Lauren M McIntyre
Additivity and trans-acting effects on gene expression in male Drosophila simulans.
Genetics 2004;168(3):1413-20.
2004: Vance G Fowler; George Sakoulas; Lauren M McIntyre; Venkata G Meka; Robert D Arbeit; Christopher H Cabell; Martin E Stryjewski; George Miltiades Eliopoulos; L Barth Reller; G Ralph Corey; Tiffanny Jones; Natalie Lucindo; Michael Yeaman; Arnold S Bayer
Persistent bacteremia due to methicillin-resistant Staphylococcus aureus infection is associated with agr dysfunction and low-level in vitro resistance to thrombin-induced platelet microbicidal protein.
The Journal of infectious diseases 2004;190(6):1140-9.
2004: Sergey V Nuzhdin; Marta L Wayne; Kristy L Harmon; Lauren M McIntyre
Common pattern of evolution of gene expression level and protein sequence in Drosophila.
Molecular biology and evolution 2004;21(7):1308-17.
2004: A M Pirttilä; Lauren M McIntyre; Gary A Payne; Charles P Woloshuk
Expression profile analysis of wild-type and fcc1 mutant strains of Fusarium verticillioides during fumonisin biosynthesis.
Fungal genetics and biology : FG & B 2004;41(6):647-56.
2004: Joao H F Pedra; Lauren M McIntyre; Michael E Scharf; Barry R Pittendrigh
Genome-wide transcription profile of field- and laboratory-selected dichlorodiphenyltrichloroethane (DDT)-resistant Drosophila.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(18):7034-9.
2004: Katy L Simonsen; Lauren M McIntyre
Using alpha wisely: improving power to detect multiple QTL.
Statistical applications in genetics and molecular biology 2004;3():Article1.
2003: Cynthia J Coffman; Rebecca W Doerge; Marta L Wayne; Lauren M McIntyre
Intersection tests for single marker QTL analysis can be more powerful than two marker QTL analysis.
BMC genetics 2003;4():10.
2002: Marta L Wayne; Lauren M McIntyre
Combining mapping and arraying: An approach to candidate gene identification.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(23):14903-6.
2002: Wilfred Vermerris; Karen J Thompson; Lauren M McIntyre
The maize Brown midrib1 locus affects cell wall composition and plant development in a dose-dependent manner.
Heredity 2002;88(6):450-7.
2002: Gerold Bepler; Ashish Gautam; Lauren M McIntyre; Amy F Beck; David S Chervinsky; Young-Chul Kim; Diana M Pitterle; Andrew Hyland
Prognostic significance of molecular genetic aberrations on chromosome segment 11p15.5 in non-small-cell lung cancer.
Journal of clinical oncology : official journal of the American Society of Clinical Oncology 2002;20(5):1353-60.
2002: Wilfred Vermerris; Karen J Thompson; Lauren M McIntyre; John D Axtell
Evidence for an evolutionarily conserved interaction between cell wall biosynthesis and flowering in maize and sorghum.
BMC evolutionary biology 2002;2():2.
2001: CK Rosenberg; Thomas J Cummings; Ann M Saunders; C Widico; Lauren M McIntyre; Christine M Hulette
Dementia with Lewy bodies and Alzheimer's disease.
Acta neuropathologica 2001;102(6):621-6.
2001: Lauren M McIntyre; Cynthia J Coffman; Rebecca W Doerge
Detection and localization of a single binary trait locus in experimental populations.
Genetical research 2001;78(1):79-92.
2001: Lauren M McIntyre; KC O'Briant; C M McBride; Gerold Bepler
Rater agreement and utility of the mutagen-induced chromosome damage assay.
Anticancer research 2001;21(1B):605-9.
2001: B Mitchell Peck; D A Asch; Susan Dorr Goold; Debra Roter; Peter A Ubel; Lauren M McIntyre; KH Abbott; J A Hoff; Celine M Koropchak; James A Tulsky
Measuring patient expectations: does the instrument affect satisfaction or expectations?
Medical care 2001;39(1):100-8.
2000: Vance G Fowler; Lauren M McIntyre; Michael Yeaman; Gail E Peterson; L Barth Reller; G Ralph Corey; Dannah Wilde Wray; Arnold S Bayer
In vitro resistance to thrombin-induced platelet microbicidal protein in isolates of Staphylococcus aureus from endocarditis patients correlates with an intravascular device source.
The Journal of infectious diseases 2000;182(4):1251-4.
2000: A L Oberg; J A Ferguson; Lauren M McIntyre; R D Horner
Incidence of stroke and season of the year: evidence of an association.
American journal of epidemiology 2000;152(6):558-64.
2000: Lauren M McIntyre; Eden R Martin; Katy L Simonsen; Norman L Kaplan
Circumventing multiple testing: a multilocus Monte Carlo approach to testing for association.
Genetic epidemiology 2000;19(1):18-29.
2000: Karen E Steinhauser; Elizabeth C Clipp; Maya McNeilly; Nicholas A Christakis; Lauren M McIntyre; James A Tulsky
In search of a good death: observations of patients, families, and providers.
Annals of internal medicine 2000;132(10):825-32.
2000: Hayden B Bosworth; KS Parsey; Marian I Butterfield; Lauren M McIntyre; Eugene Z Oddone; Karen M Stechuchak; Lori A Bastian
Racial variation in wanting and obtaining mental health services among women veterans in a primary care clinic.
Journal of the National Medical Association 2000;92(5):231-6.
1999: E M Johnston; Lauren M McIntyre; J A Hoff; Gerold Bepler
The effect of orchiectomy on lung cancer survival.
Anticancer research 1999;19(6C):5567-70.
1999: Wilfred Vermerris; Lauren M McIntyre
Time to flowering in brown midrib mutants of maize: an alternative approach to the analysis of developmental traits.
Heredity 1999;83 ( Pt 2)():171-8.
1999: Lauren M McIntyre; Marian I Butterfield; Kavita Nanda; KS Parsey; Karen M Stechuchak; A W McChesney; C Koons; Lori A Bastian
Validation of a Trauma Questionnaire in veteran women.
Journal of general internal medicine 1999;14(3):186-9.
1998: Christine M Hulette; Kathleen A Welsh-Bohmer; M G Murray; Ann M Saunders; Deborah C Mash; Lauren M McIntyre
Neuropathological and neuropsychological changes in "normal" aging: evidence for preclinical Alzheimer disease in cognitively normal individuals.
Journal of neuropathology and experimental neurology 1998;57(12):1168-74.
1997: Lauren M McIntyre; Bruce S Weir
Hardy-Weinberg testing for continuous data.
Genetics 1997;147(4):1965-75.