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John McPherson

Research Profile

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Bacterial Artificial Chromosomes

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DNA Fingerprinting

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Steven L Klein; Daniela S Gerhard; Lukas Wagner; Paul Richardson; Lynn M Schriml; Amy K Sater; Wesley C Warren; John D McPherson
Resources for genetic and genomic studies of Xenopus.
Julie E Horvath; Cassy L Gulden; Rhea Vallente; Marla Y Eichler; ventura Mario; John D McPherson; Tina Graves; Richard K Wilson; Stuart Schwartz; Mariano Rocchi; Evan E Eichler
Punctuated duplication seeding events during the evolution of human chromosome 2p11.
Chris T Yohn; Zhaoshi Jiang; Sean D McGrath; Karen E Hayden; Philipp Khaitovich; Matthew E Johnson; Marla Y Eichler; John D McPherson; Shaying Zhao; Svante Pääbo; Evan E Eichler
Lineage-specific expansions of retroviral insertions within the genomes of African great apes but not humans and orangutans.

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All Publications

2006: Steven L Klein; Daniela S Gerhard; Lukas Wagner; Paul Richardson; Lynn M Schriml; Amy K Sater; Wesley C Warren; John D McPherson
Resources for genetic and genomic studies of Xenopus.
Methods in molecular biology (Clifton, N.J.) 2006;322():1-16.
2005: Julie E Horvath; Cassy L Gulden; Rhea Vallente; Marla Y Eichler; ventura Mario; John D McPherson; Tina Graves; Richard K Wilson; Stuart Schwartz; Mariano Rocchi; Evan E Eichler
Punctuated duplication seeding events during the evolution of human chromosome 2p11.
Genome research 2005;15(7):914-27.
2005: Chris T Yohn; Zhaoshi Jiang; Sean D McGrath; Karen E Hayden; Philipp Khaitovich; Matthew E Johnson; Marla Y Eichler; John D McPherson; Shaying Zhao; Svante Pääbo; Evan E Eichler
Lineage-specific expansions of retroviral insertions within the genomes of African great apes but not humans and orangutans.
PLoS biology 2005;3(4):e110.
2004: vincent magrini; Wesley C Warren; John Wallis; William Goldman; Jian Xu; Elaine R Mardis; John D McPherson
Fosmid-based physical mapping of the Histoplasma capsulatum genome.
Genome research 2004;14(8):1603-9.
2003: Jeremy J Gibson-Brown; Kazutoyo Osoegawa; John D McPherson; Robert H Waterston; Pieter J de Jong; Dan S Rokhsar; Linda Z Holland
A proposal to sequence the amphioxus genome submitted to the Joint Genome Institute of the US Department of Energy.
Journal of experimental zoology. Part B, Molecular and developmental evolution 2003;300(1):5-22.
2003: Julie E Horvath; Cassy L Gulden; Jeffrey A Bailey; Chris T Yohn; John D McPherson; A Prescott; B A Roe; Pieter J de Jong; ventura Mario; Doriana Misceo; Nicoletta Archidiacono; Shaying Zhao; Stuart Schwartz; Mariano Rocchi; Evan E Eichler
Using a pericentromeric interspersed repeat to recapitulate the phylogeny and expansion of human centromeric segmental duplications.
Molecular biology and evolution 2003;20(9):1463-79.
2003: Daniel R Fuhrmann; Martin I Krzywinski; Readman Chiu; Parvaneh Saeedi; Jacqueline E Schein; Ian Bosdet; Asif T Chinwalla; LaDeana W Hillier; Robert H Waterston; John D McPherson; Steven J M Jones; Marco A Marra
Software for automated analysis of DNA fingerprinting gels.
Genome research 2003;13(5):940-53.
2003: Robert H Waterston; LaDeana W Hillier; Lucinda Fulton; Robert S Fulton; Tina Graves; Kymberlie H Pepin; Peer Bork; Mikita Suyama; David Torrents; Asif T Chinwalla; Elaine R Mardis; John D McPherson; Richard K Wilson
The human genome: genes, pseudogenes, and variation on chromosome 7.
Cold Spring Harbor symposia on quantitative biology 2003;68():13-22.
2001: K Lindblad-Toh; E S Lander; John D McPherson; Robert H Waterston; J Rodgers; E Birney
Progress in sequencing the mouse genome.
Genesis (New York, N.Y. : 2000) 2001;31(4):137-41.
2001: C A Tilford; Tomoko Kuroda-Kawaguchi; Helen Skaletsky; Steve Rozen; Laura G Brown; M Rosenberg; John D McPherson; K Wylie; M Sekhon; Tamara Kucaba; Robert H Waterston; David C Page
A physical map of the human Y chromosome.
Nature 2001;409(6822):943-5.
1999: Rachel E Ellsworth; Victor Ionasescu; Charles C Searby; Val C Sheffield; VV Braden; Tamara Kucaba; John D McPherson; Marco A Marra; Eric Green
The CMT2D locus: refined genetic position and construction of a bacterial clone-based physical map.
Genome research 1999;9(6):568-74.
1997: Marco A Marra; Tamara Kucaba; Nicole L Dietrich; Eric Green; B Brownstein; Richard K Wilson; K M McDonald; LaDeana W Hillier; John D McPherson; Robert H Waterston
High throughput fingerprint analysis of large-insert clones.
Genome research 1997;7(11):1072-84.