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Andreas Baxevanis

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

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Publications

TOP 3
Roessler Erich; Pei Wuhong; Ouspenskaia Maia V; Karkera Jayaprakash D; Veléz Jorge Ivan; Banerjee-Basu Sharmilla; Gibney Gretchen; Lupo Philip J; Mitchell Laura E; Towbin Jeffrey A; Bowers Peter; Belmont John W; Goldmuntz Elizabeth; Baxevanis Andreas D; Feldman Benjamin; Muenke Maximilian
Cumulative ligand activity of NODAL mutations and modifiers are linked to human heart defects and holoprosencephaly.
McBride Colleen M; Alford Sharon Hensley; Reid Robert J; Larson Eric B; Baxevanis Andreas D; Brody Lawrence C
Characteristics of users of online personalized genomic risk assessments: implications for physician-patient interactions.
McBride Colleen M; Alford Sharon Hensley; Reid Robert J; Larson Eric B; Baxevanis Andreas D; Brody Lawrence C
Putting science over supposition in the arena of personalized genomics.

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All Publications

2009: Roessler Erich; Pei Wuhong; Ouspenskaia Maia V; Karkera Jayaprakash D; Veléz Jorge Ivan; Banerjee-Basu Sharmilla; Gibney Gretchen; Lupo Philip J; Mitchell Laura E; Towbin Jeffrey A; Bowers Peter; Belmont John W; Goldmuntz Elizabeth; Baxevanis Andreas D; Feldman Benjamin; Muenke Maximilian
Cumulative ligand activity of NODAL mutations and modifiers are linked to human heart defects and holoprosencephaly.
Molecular genetics and metabolism 2009;98(1-2):225-34.
2009: McBride Colleen M; Alford Sharon Hensley; Reid Robert J; Larson Eric B; Baxevanis Andreas D; Brody Lawrence C
Characteristics of users of online personalized genomic risk assessments: implications for physician-patient interactions.
Genetics in medicine : official journal of the American College of Medical Genetics 2009;11(8):582-7.
2008: McBride Colleen M; Alford Sharon Hensley; Reid Robert J; Larson Eric B; Baxevanis Andreas D; Brody Lawrence C
Putting science over supposition in the arena of personalized genomics.
Nature genetics 2008;40(8):939-42.
2007: Karkera J D; Lee J S; Roessler E; Banerjee-Basu S; Ouspenskaia M V; Mez J; Goldmuntz E; Bowers P; Towbin J; Belmont J W; Baxevanis A D; Schier A F; Muenke M
Loss-of-function mutations in growth differentiation factor-1 (GDF1) are associated with congenital heart defects in humans.
American journal of human genetics 2007;81(5):987-94.
2007: Elnitski Laura L; Shah Prachi; Moreland R Travis; Umayam Lowell; Wolfsberg Tyra G; Baxevanis Andreas D
The ENCODEdb portal: simplified access to ENCODE Consortium data.
Genome research 2007;17(6):954-9.
2007: Leonard Shonda A; Littlejohn Timothy G; Baxevanis Andreas D
Common file formats.
Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] 2007;Appendix 1():Appendix 1B.
2007: Ryan Joseph F; Baxevanis Andreas D
Hox, Wnt, and the evolution of the primary body axis: insights from the early-divergent phyla.
Biology direct 2007;2():37.
2007: Ryan Joseph F; Mazza Maureen E; Pang Kevin; Matus David Q; Baxevanis Andreas D; Martindale Mark Q; Finnerty John R
Pre-bilaterian origins of the Hox cluster and the Hox code: evidence from the sea anemone, Nematostella vectensis.
PloS one 2007;2(1):e153.
2006: Baxevanis Andreas D
Searching the NCBI databases using Entrez.
Current protocols in human genetics / editorial board, Jonathan L. Haines ... [et al.] 2006;Chapter 6():Unit 6.10.
2006: Baxevanis Andreas D
Searching the NCBI databases using Entrez.
Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] 2006;Chapter 1():Unit 1.3.
2006: Baxevanis Andreas D
The importance of biological databases in biological discovery.
Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] 2006;Chapter 1():Unit 1.1.
2006: Mariño-Ramírez Leonardo; Hsu Benjamin; Baxevanis Andreas D; Landsman David
The Histone Database: a comprehensive resource for histones and histone fold-containing proteins.
Proteins 2006;62(4):838-42.
2005: Kowarz Laurence; Goker-Alpan Ozlem; Banerjee-Basu Sharmila; LaMarca Mary E; Kinlaw Leah; Schiffmann Raphael; Baxevanis Andreas D; Sidransky Ellen
Gaucher mutation N188S is associated with myoclonic epilepsy.
Human mutation 2005;26(3):271-3; author reply 274-5.
2004: Gillanders Elizabeth M; Masiello Anthony; Gildea Derek; Umayam Lowell; Duggal Priya; Jones Mary Pat; Klein Alison P; Freas-Lutz Diana; Ibay Grace; Trout Ken; Wolfsberg Tyra G; Trent Jeffrey M; Bailey-Wilson Joan E; Baxevanis Andreas D
GeneLink: a database to facilitate genetic studies of complex traits.
BMC genomics 2004;5(1):81.
2004: Baxevanis Andreas D
An overview of gene identification: approaches, strategies, and considerations.
Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] 2004;Chapter 4():Unit4.1.
2004: Banerjee-Basu Sharmila; Baxevanis Andreas D
Structural analysis of disease-causing mutations in the P-subfamily of forkhead transcription factors.
Proteins 2004;54(4):639-47.
2004: Saleem R A; Banerjee-Basu S; Murphy T C; Baxevanis A; Walter M A
Essential structural and functional determinants within the forkhead domain of FOXC1.
Nucleic acids research 2004;32(14):4182-93.
2003: Saleem Ramsey A; Banerjee-Basu Sharmila; Berry Fred B; Baxevanis Andreas D; Walter Michael A
Structural and functional analyses of disease-causing missense mutations in the forkhead domain of FOXC1.
Human molecular genetics 2003;12(22):2993-3005.
2003: Baxevanis Andreas D
Using genomic databases for sequence-based biological discovery.
Molecular medicine (Cambridge, Mass.) 2003;9(9-12):185-92.
2003: Baxevanis Andreas D; Collins Francis S
Power to the people. A User's Guide to the Human Genome. Foreward.
Nature genetics 2003;35 Suppl 1():2.
2003: Baxevanis Andreas D
Searching Online Mendelian Inheritance in Man (OMIM) for information for genetic loci involved in human disease.
Current protocols in human genetics / editorial board, Jonathan L. Haines ... [et al.] 2003;Chapter 9():Unit9.13.
2003: Banerjee-Basu Sharmila; Moreland Travis; Hsu Benjamin J; Trout Kenneth L; Baxevanis Andreas D
The Homeodomain Resource: 2003 update.
Nucleic acids research 2003;31(1):304-6.
2003: Baxevanis Andreas D
The Molecular Biology Database Collection: 2003 update.
Nucleic acids research 2003;31(1):1-12.
2002: Banerjee-Basu Sharmila; Baxevanis Andreas D
Molecular modeling of mutations in the DNA-binding domain of the oncoprotein Qin.
Molecular cancer therapeutics 2002;1(13):1237-41.
2002: Wolfsberg Tyra G; Wetterstrand Kris A; Guyer Mark S; Collins Francis S; Baxevanis Andreas D
A user's guide to the human genome.
Nature genetics 2002;32 Suppl():1-79.
2002: Baxevanis Andreas D
Searching Online Mendelian Inheritance in Man (OMIM) for information for genetic loci involved in human disease.
Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] 2002;Chapter 1():Unit 1.2.
2002: Banerjee-Basu Sharmila; Baxevanis Andreas D
The DNA-binding region of RAG 1 is not a homeodomain.
Genome biology 2002;3(8):INTERACTIONS1004.
2002: Makalowska Izabela; Sood Raman; Faruque Mezbah U; Hu Ping; Robbins Christiane M; Eddings Erica M; Mestre Juanita D; Baxevanis Andreas D; Carpten John D
Identification of six novel genes by experimental validation of GeneMachine predicted genes.
Gene 2002;284(1-2):203-13.
2002: Sullivan Steven; Sink Daniel W; Trout Kenneth L; Makalowska Izabela; Taylor Patrick M; Baxevanis Andreas D; Landsman David
The Histone Database.
Nucleic acids research 2002;30(1):341-2.
2002: Baxevanis Andreas D
The Molecular Biology Database Collection: 2002 update.
Nucleic acids research 2002;30(1):1-12.
2001: Makalowska I; Ryan J F; Baxevanis A D
GeneMachine: gene prediction and sequence annotation.
Bioinformatics (Oxford, England) 2001;17(9):843-4.
2001: Baxevanis A D
Gene identification: methods and considerations.
Current protocols in human genetics / editorial board, Jonathan L. Haines ... [et al.] 2001;Chapter 6():Unit 6.6.
2001: Banerjee-Basu S; Baxevanis A D
Molecular evolution of the homeodomain family of transcription factors.
Nucleic acids research 2001;29(15):3258-69.
2001: Baxevanis A D; Ouellette B F
Internet basics.
Current protocols in protein science / editorial board, John E. Coligan ... [et al.] 2001;Chapter 2():Unit2.4.
2001: Baxevanis A D; Ouellette B F
Internet basics for biologists.
Current protocols in human genetics / editorial board, Jonathan L. Haines ... [et al.] 2001;Appendix 3():Appendix 3J.
2001: Sood R; Bonner T I; Makalowska I; Stephan D A; Robbins C M; Connors T D; Morgenbesser S D; Su K; Faruque M U; Pinkett H; Graham C; Baxevanis A D; Klinger K W; Landes G M; Trent J M; Carpten J D
Cloning and characterization of 13 novel transcripts and the human RGS8 gene from the 1q25 region encompassing the hereditary prostate cancer (HPC1) locus.
Genomics 2001;73(2):211-22.
2001: Saleem R A; Banerjee-Basu S; Berry F B; Baxevanis A D; Walter M A
Analyses of the effects that disease-causing missense mutations have on the structure and function of the winged-helix protein FOXC1.
American journal of human genetics 2001;68(3):627-41.
2001: Banerjee-Basu S; Sink D W; Baxevanis A D
The Homeodomain Resource: sequences, structures, DNA binding sites and genomic information.
Nucleic acids research 2001;29(1):291-3.
2001: Baxevanis A D
The Molecular Biology Database Collection: an updated compilation of biological database resources.
Nucleic acids research 2001;29(1):1-10.
2001: Banerjee-Basu S; Baxevanis A D
Predictive methods using protein sequences.
Methods of biochemical analysis 2001;43():253-82.
2001: Baxevanis A D
Predictive methods using DNA sequences.
Methods of biochemical analysis 2001;43():233-52.
2001: Baxevanis A D
Information retrieval from biological databases.
Methods of biochemical analysis 2001;43():155-85.
2001: Baxevanis A D
Bioinformatics and the Internet.
Methods of biochemical analysis 2001;43():1-17.
2000: Stone D L; Slavotinek A; Bouffard G G; Banerjee-Basu S; Baxevanis A D; Barr M; Biesecker L G
Mutation of a gene encoding a putative chaperonin causes McKusick-Kaufman syndrome.
Nature genetics 2000;25(1):79-82.
2000: Sood R; Makalowska I; Carpten J D; Robbins C M; Stephan D A; Connors T D; Morgenbesser S D; Su K; Pinkett H W; Graham C L; Quesenberry M I; Baxevanis A D; Klinger K W; Trent J M; Bonner T I
The human RGL (RalGDS-like) gene: cloning, expression analysis and genomic organization.
Biochimica et biophysica acta 2000;1491(1-3):285-8.
2000: Carpten J D; Makalowska I; Robbins C M; Scott N; Sood R; Connors T D; Bonner T I; Smith J R; Faruque M U; Stephan D A; Pinkett H; Morgenbesser S D; Su K; Graham C; Gregory S G; Williams H; McDonald L; Baxevanis A D; Klingler K W; Landes G M; Trent J M
A 6-Mb high-resolution physical and transcription map encompassing the hereditary prostate cancer 1 (HPC1) region.
Genomics 2000;64(1):1-14.
2000: Lipkin S M; Wang V; Jacoby R; Banerjee-Basu S; Baxevanis A D; Lynch H T; Elliott R M; Collins F S
MLH3: a DNA mismatch repair gene associated with mammalian microsatellite instability.
Nature genetics 2000;24(1):27-35.
2000: Banerjee-Basu S; Ryan J F; Baxevanis A D
The homeodomain resource: a prototype database for a large protein family.
Nucleic acids research 2000;28(1):329-30.
2000: Sullivan S A; Aravind L; Makalowska I; Baxevanis A D; Landsman D
The histone database: a comprehensive WWW resource for histones and histone fold-containing proteins.
Nucleic acids research 2000;28(1):320-2.
2000: Baxevanis A D
The molecular biology database collection: an online compilation of relevant database resources.
Nucleic acids research 2000;28(1):1-7.
1999: Marcelino J; Carpten J D; Suwairi W M; Gutierrez O M; Schwartz S; Robbins C; Sood R; Makalowska I; Baxevanis A; Johnstone B; Laxer R M; Zemel L; Kim C A; Herd J K; Ihle J; Williams C; Johnson M; Raman V; Alonso L G; Brunoni D; Gerstein A; Papadopoulos N; Bahabri S A; Trent J M; Warman M L
CACP, encoding a secreted proteoglycan, is mutated in camptodactyly-arthropathy-coxa vara-pericarditis syndrome.
Nature genetics 1999;23(3):319-22.
1999: Loftus S K; Chen Y; Gooden G; Ryan J F; Birznieks G; Hilliard M; Baxevanis A D; Bittner M; Meltzer P; Trent J; Pavan W
Informatic selection of a neural crest-melanocyte cDNA set for microarray analysis.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(16):9277-80.
1999: Southard-Smith E M; Collins J E; Ellison J S; Smith K J; Baxevanis A D; Touchman J W; Green E D; Dunham I; Pavan W J
Comparative analyses of the Dominant megacolon-SOX10 genomic interval in mouse and human.
Mammalian genome : official journal of the International Mammalian Genome Society 1999;10(7):744-9.
1999: Ferlanti E S; Ryan J F; Makalowska I; Baxevanis A D
WebBLAST 2.0: an integrated solution for organizing and analyzing sequence data.
Bioinformatics (Oxford, England) 1999;15(5):422-3.
1999: Southard-Smith E M; Angrist M; Ellison J S; Agarwala R; Baxevanis A D; Chakravarti A; Pavan W J
The Sox10(Dom) mouse: modeling the genetic variation of Waardenburg-Shah (WS4) syndrome.
Genome research 1999;9(3):215-25.
1999: Stephan D A; Gillanders E; Vanderveen D; Freas-Lutz D; Wistow G; Baxevanis A D; Robbins C M; VanAuken A; Quesenberry M I; Bailey-Wilson J; Juo S H; Trent J M; Smith L; Brownstein M J
Progressive juvenile-onset punctate cataracts caused by mutation of the gammaD-crystallin gene.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(3):1008-12.
1999: Banerjee-Basu S; Ferlanti E S; Ryan J F; Baxevanis A D
The Homeodomain Resource: sequences, structures and genomic information.
Nucleic acids research 1999;27(1):336-7.
1999: Makalowska I; Ferlanti E S; Baxevanis A D; Landsman D
Histone Sequence Database: sequences, structures, post-translational modifications and genetic loci.
Nucleic acids research 1999;27(1):323-4.
1999: Banerjee-Basu S; Landsman D; Baxevanis A D
Threading analysis of prospero-type homeodomains.
In silico biology 1999;1(3):163-73.
1999: Banerjee-Basu S; Baxevanis A D
Threading analysis of the Pitx2 homeodomain: predicted structural effects of mutations causing Rieger syndrome and iridogoniodysgenesis.
Human mutation 1999;14(4):312-9.
1998: Baxevanis A D; Landsman D
Histone Sequence Database: new histone fold family members.
Nucleic acids research 1998;26(1):372-5.
1998: Baxevanis A D; Landsman D
Homology model building of Hho1p supports its role as a yeast histone H1 protein.
In silico biology 1998;1(1):5-11.
1998: Baxevanis A D; Landsman D
Predictive methods using protein sequences.
Methods of biochemical analysis 1998;39():246-67.
1998: Baxevanis A D
Practical aspects of multiple sequence alignment.
Methods of biochemical analysis 1998;39():172-88.
1998: Baxevanis A D
Information retrieval from biological databases.
Methods of biochemical analysis 1998;39():98-120.
1998: Baxevanis A D
The Internet and the biologist.
Methods of biochemical analysis 1998;39():1-15.
1997: Everett L A; Glaser B; Beck J C; Idol J R; Buchs A; Heyman M; Adawi F; Hazani E; Nassir E; Baxevanis A D; Sheffield V C; Green E D
Pendred syndrome is caused by mutations in a putative sulphate transporter gene (PDS).
Nature genetics 1997;17(4):411-22.
1997: Woodage T; Basrai M A; Baxevanis A D; Hieter P; Collins F S
Characterization of the CHD family of proteins.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(21):11472-7.
1997: Baxevanis A D; Landsman D
Histone and histone fold sequences and structures: a database.
Nucleic acids research 1997;25(1):272-3.
1996: Makalowski W; Récipon H; Baxevanis A D
Web alert. Expression systems.
Current opinion in biotechnology 1996;7(5):563.
1996: Baxevanis A D; Makalowski W; Ouellette B F; Récipon H
Web alert. Protein engineering.
Current opinion in biotechnology 1996;7(4):462.
1996: Baxevanis A D; Landsman D
Histone Sequence Database: a compilation of highly-conserved nucleoprotein sequences.
Nucleic acids research 1996;24(1):245-7.
1995: Baxevanis A D; Landsman D
The Internet biologist.
The FASEB journal : official publication of the Federation of American Societies for Experimental Biology 1995;9(11):994.
1995: Baxevanis A D; Arents G; Moudrianakis E N; Landsman D
A variety of DNA-binding and multimeric proteins contain the histone fold motif.
Nucleic acids research 1995;23(14):2685-91.
1995: Baxevanis A D; Landsman D
The HMG-1 box protein family: classification and functional relationships.
Nucleic acids research 1995;23(9):1604-13.
1995: Karantza V; Baxevanis A D; Freire E; Moudrianakis E N
Thermodynamic studies of the core histones: ionic strength and pH dependence of H2A-H2B dimer stability.
Biochemistry 1995;34(17):5988-96.
1995: Baxevanis A D; Bryant S H; Landsman D
Homology model building of the HMG-1 box structural domain.
Nucleic acids research 1995;23(6):1019-29.
1993: Baxevanis A D; Vinson C R
Interactions of coiled coils in transcription factors: where is the specificity?
Current opinion in genetics & development 1993;3(2):278-85.
1992: Moehs C P; Baxevanis A D; Moudrianakis E N; Spiker S
Enhanced stability of histone octamers from plant nucleosomes: role of H2A and H2B histones.
Biochemistry 1992;31(44):10844-51.
1991: Baxevanis A D; Godfrey J E; Moudrianakis E N
Associative behavior of the histone (H3-H4)2 tetramer: dependence on ionic environment.
Biochemistry 1991;30(36):8817-23.
1990: Baxevanis A D; Godfrey J E; Moudrianakis E N; Park K; Fasman G D
Effect of aggregation of histone octamers in high-salt solutions on circular dichroism spectra.
Biochemistry 1990;29(4):973-6.
1990: Godfrey J E; Baxevanis A D; Moudrianakis E N
Spectropolarimetric analysis of the core histone octamer and its subunits.
Biochemistry 1990;29(4):965-72.

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Andreas Baxevanis

Research Profile (preview)

Concepts & Ideas

Genes & Molecular Sequences

Occupations

Activities & Behaviors

Procedures

Living Beings

Chemicals & Drugs

Network (preview)

Publications

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Visualized networks:

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Research Profiles:

Geonetwork of Andreas Baxevanis (preview)

All Publications