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Joachim Messing

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TOP 3
Wolfgang Goettel; Joachim Messing
Epiallele biogenesis in maize.
Martín Calviño; Joachim Messing
Discovery of MicroRNA169 gene copies in genomes of flowering plants through positional information.
Wolfgang Goettel; Joachim Messing
Paramutagenicity of a p1 epiallele in maize.

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All Publications

2013: Wolfgang Goettel; Joachim Messing
Epiallele biogenesis in maize.
Gene 2013;516(1):8-23.
2013: Martín Calviño; Joachim Messing
Discovery of MicroRNA169 gene copies in genomes of flowering plants through positional information.
Genome biology and evolution 2013;5(2):402-17.
2013: Wolfgang Goettel; Joachim Messing
Paramutagenicity of a p1 epiallele in maize.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2013;126(1):159-77.
2012: Yongrui Wu; Joachim Messing
Rapid divergence of prolamin gene promoters of maize after gene amplification and dispersal.
Genetics 2012;192(2):507-19.
2012: Martín Calviño; Joachim Messing
Sweet sorghum as a model system for bioenergy crops.
Current opinion in biotechnology 2012;23(3):323-9.
2012: Jian-Hong Xu; Jeffrey L Bennetzen; Joachim Messing
Dynamic gene copy number variation in collinear regions of grass genomes.
Molecular biology and evolution 2012;29(2):861-71.
2012: Wenqin Wang; Yongrui Wu; Joachim Messing
The mitochondrial genome of an aquatic plant, Spirodela polyrhiza.
PloS one 2012;7(10):e46747.
2012: Yongrui Wu; Wenqin Wang; Joachim Messing
Balancing of sulfur storage in maize seed.
BMC plant biology 2012;12():77.
2012: Yongrui Wu; Joachim Messing
RNA interference can rebalance the nitrogen sink of maize seeds without losing hard endosperm.
PloS one 2012;7(2):e32850.
2012: Wenqin Wang; Joachim Messing
Analysis of ADP-glucose pyrophosphorylase expression during turion formation induced by abscisic acid in Spirodela polyrhiza (greater duckweed).
BMC plant biology 2012;12():5.
2011: Yongrui Wu; Joachim Messing
Novel genetic selection system for quantitative trait loci of quality protein maize.
Genetics 2011;188(4):1019-22.
2011: Mihai Miclaus; Jian-Hong Xu; Joachim Messing
Differential gene expression and epiregulation of alpha zein gene copies in maize haplotypes.
PLoS genetics 2011;7(6):e1002131.
2011: Wenqin Wang; Joachim Messing
High-throughput sequencing of three Lemnoideae (duckweeds) chloroplast genomes from total DNA.
PloS one 2011;6(9):e24670.
2011: Martín Calviño; Rémy Bruggmann; Joachim Messing
Characterization of the small RNA component of the transcriptome from grain and sweet sorghum stems.
BMC genomics 2011;12():356.
2010: Yongrui Wu; Joachim Messing
Rescue of a dominant mutant with RNA interference.
Genetics 2010;186(4):1493-6.
2010: Yongrui Wu; David R Holding; Joachim Messing
Gamma-zeins are essential for endosperm modification in quality protein maize.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(29):12810-5.
2010: Yongrui Wu; Joachim Messing
RNA interference-mediated change in protein body morphology and seed opacity through loss of different zein proteins.
Plant physiology 2010;153(1):337-47.
2010: Wolfgang Goettel; Joachim Messing
Divergence of gene regulation through chromosomal rearrangements.
BMC genomics 2010;11():678.
2010: Wenqin Wang; Yongrui Wu; Yiheng Yan; Marina Ermakova; Randall Kerstetter; Joachim Messing
DNA barcoding of the Lemnaceae, a family of aquatic monocots.
BMC plant biology 2010;10():205.
2009: Jian-Hong Xu; Joachim Messing
Amplification of prolamin storage protein genes in different subfamilies of the Poaceae.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2009;119(8):1397-412.
2009: Yongrui Wu; Wolfgang Goettel; Joachim Messing
Non-Mendelian regulation and allelic variation of methionine-rich delta-zein genes in maize.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2009;119(4):721-31.
2009: Wolfgang Goettel; Joachim Messing
Change of gene structure and function by non-homologous end-joining, homologous recombination, and transposition of DNA.
PLoS genetics 2009;5(6):e1000516.
2009: Joachim Messing
Synergy of two reference genomes for the grass family.
Plant physiology 2009;149(1):117-24.
2008: Jian-Hong Xu; Joachim Messing
Organization of the prolamin gene family provides insight into the evolution of the maize genome and gene duplications in grass species.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(38):14330-5.
2008: Jian-Hong Xu; Joachim Messing
Diverged copies of the seed regulatory Opaque-2 gene by a segmental duplication in the progenitor genome of rice, sorghum, and maize.
Molecular plant 2008;1(5):760-9.
2008: David R Holding; Brenda G Hunter; Taijoon Chung; Bryan C Gibbon; Clark F Ford; Arvind K Bharti; Joachim Messing; Bruce R Hamaker; Brian A Larkins
Genetic analysis of opaque2 modifier loci in quality protein maize.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2008;117(2):157-70.
2008: William Nelson; Meizhong Luo; Jianxin Ma; Matt Estep; James Estill; Ruifeng He; Jayson Talag; Nicholas B Sisneros; Dave Kudrna; Hyeran Kim; Jetty S S Ammiraju; Kristi Collura; Arvind K Bharti; Joachim Messing; Rod A Wing; Phillip SanMiguel; Jeffrey L Bennetzen; Carol Soderlund
Methylation-sensitive linking libraries enhance gene-enriched sequencing of complex genomes and map DNA methylation domains.
BMC genomics 2008;9():621.
2008: Joachim Messing; Jeffrey L Bennetzen
Grass genome structure and evolution.
Genome dynamics 2008;4():41-56.
2007: David Rotter; Arvind K Bharti; Huaijun Michael Li; Chongyuan Luo; Stacy A Bonos; Suleiman Bughrara; Geunhwa Jung; Joachim Messing; William A Meyer; Stephen Rudd; Scott E Warnke; Faith C Belanger
Analysis of EST sequences suggests recent origin of allotetraploid colonial and creeping bentgrasses.
Molecular genetics and genomics : MGG 2007;278(2):197-209.
2007: Fusheng Wei; Ed Coe; William Nelson; Arvind K Bharti; Friedrich W Engler; Ed Butler; HyeRan Kim; José L Goicoechea; Mingsheng Chen; Seunghee Lee; Galina Fuks; Hector Sanchez-Villeda; Steven Schroeder; Zhiwei Fang; Michael D McMullen; Georgia Davis; John E Bowers; Andrew H Paterson; Mary Schaeffer; Jack Gardiner; Karen Cone; Joachim Messing; Carol Soderlund; Rod A Wing
Physical and genetic structure of the maize genome reflects its complex evolutionary history.
PLoS genetics 2007;3(7):e123.
2007: A Mark Settles; David R Holding; Bao Cai Tan; Susan Latshaw; Juan Liu; Masaharu Suzuki; Li Li; Brent A O'Brien; Diego S Fajardo; Ewa Wroclawska; Chi-Wah Tseung; Jinsheng Lai; Charles T Hunter; Wayne T Avigne; John Baier; Joachim Messing; L Curtis Hannah; Karen E Koch; Philip W Becraft; Brian A Larkins; Donald R McCarty
Sequence-indexed mutations in maize using the UniformMu transposon-tagging population.
BMC genomics 2007;8():116.
2007: William M Nelson; Jan Dvorak; Ming-Cheng Luo; Joachim Messing; Rod A Wing; Carol Soderlund
Efficacy of clone fingerprinting methodologies.
Genomics 2007;89(1):160-5.
2006: Rémy Bruggmann; Arvind K Bharti; Heidrun Gundlach; Jinsheng Lai; Sarah Young; Ana C Pontaroli; Fusheng Wei; Georg Haberer; Galina Fuks; Chunguang Du; Christina Raymond; Matt C Estep; Renyi Liu; Jeffrey L Bennetzen; Agnes P Chan; Pablo D Rabinowicz; John Quackenbush; W Brad Barbazuk; Rod A Wing; Bruce Birren; Chad Nusbaum; Steve Rounsley; Klaus F X Mayer; Joachim Messing
Uneven chromosome contraction and expansion in the maize genome.
Genome research 2006;16(10):1241-51.
2006: Jian-Hong Xu; Joachim Messing
Maize haplotype with a helitron-amplified cytidine deaminase gene copy.
BMC genetics 2006;7():52.
2006: Chunguang Du; Zuzana Swigonová; Joachim Messing
Retrotranspositions in orthologous regions of closely related grass species.
BMC evolutionary biology 2006;6():62.
2005: Georg Haberer; Sarah Young; Arvind K Bharti; Heidrun Gundlach; Christina Raymond; Galina Fuks; Ed Butler; Rod A Wing; Steve Rounsley; Bruce Birren; Chad Nusbaum; Klaus F X Mayer; Joachim Messing
Structure and architecture of the maize genome.
Plant physiology 2005;139(4):1612-24.
2005: Donald R McCarty; A Mark Settles; Masaharu Suzuki; Bao Cai Tan; Susan Latshaw; Timothy G Porch; Kevin Robin; John Baier; Wayne T Avigne; Jinsheng Lai; Joachim Messing; Karen E Koch; L Curtis Hannah
Steady-state transposon mutagenesis in inbred maize.
The Plant journal : for cell and molecular biology 2005;44(1):52-61.
2005: William M Nelson; Arvind K Bharti; Ed Butler; Fusheng Wei; Galina Fuks; Hyeran Kim; Rod A Wing; Joachim Messing; Carol Soderlund
Whole-genome validation of high-information-content fingerprinting.
Plant physiology 2005;139(1):27-38.
2005: Jianxin Ma; Phillip SanMiguel; Jinsheng Lai; Joachim Messing; Jeffrey L Bennetzen
DNA rearrangement in orthologous orp regions of the maize, rice and sorghum genomes.
Genetics 2005;170(3):1209-20.
2005: Zuzana Swigonová; Jeffrey L Bennetzen; Joachim Messing
Structure and evolution of the r/b chromosomal regions in rice, maize and sorghum.
Genetics 2005;169(2):891-906.
2004: Joachim Messing; Arvind K Bharti; Wojciech M Karlowski; Heidrun Gundlach; Hye Ran Kim; Yeisoo Yu; Fusheng Wei; Galina Fuks; Carol Soderlund; Klaus F X Mayer; Rod A Wing
Sequence composition and genome organization of maize.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(40):14349-54.
2004: Jinsheng Lai; Nrisingha Dey; Cheol-Soo Kim; Arvind K Bharti; Stephen Rudd; Klaus F X Mayer; Brian A Larkins; Philip Becraft; Joachim Messing
Characterization of the maize endosperm transcriptome and its comparison to the rice genome.
Genome research 2004;14(10A):1932-7.
2004: Jinsheng Lai; Jianxin Ma; Zuzana Swigonová; Wusirika Ramakrishna; Eric Linton; Victor Llaca; Bahattin Tanyolac; Yong-Jin Park; O-Young Jeong; Jeffrey L Bennetzen; Joachim Messing
Gene loss and movement in the maize genome.
Genome research 2004;14(10A):1924-31.
2004: Zuzana Swigonová; Jinsheng Lai; Jianxin Ma; Wusirika Ramakrishna; Victor Llaca; Jeffrey L Bennetzen; Joachim Messing
Close split of sorghum and maize genome progenitors.
Genome research 2004;14(10A):1916-23.
2004: Richard M Clark; Eric Linton; Joachim Messing; John Doebley
Pattern of diversity in the genomic region near the maize domestication gene tb1.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(3):700-7.
2004: Zuzana Swigonova; Jinsheng Lai; Jianxin Ma; Wusirika Ramakrishna; Victor Llaca; Jeffrey L Bennetzen; Joachim Messing
On the tetraploid origin of the maize genome.
Comparative and functional genomics 2004;5(3):281-4.
2004: Rentao Song; Gregorio Segal; Joachim Messing
Expression of the sorghum 10-member kafirin gene cluster in maize endosperm.
Nucleic acids research 2004;32(22):e189.
2003: Gregorio Segal; Rentao Song; Joachim Messing
A new opaque variant of maize by a single dominant RNA-interference-inducing transgene.
Genetics 2003;165(1):387-97.
2003: Rentao Song; Joachim Messing
Gene expression of a gene family in maize based on noncollinear haplotypes.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(15):9055-60.
2002: Wusirika Ramakrishna; John Emberton; Phillip SanMiguel; Matthew Ogden; Victor Llaca; Joachim Messing; Jeffrey L Bennetzen
Comparative sequence analysis of the sorghum Rph region and the maize Rp1 resistance gene complex.
Plant physiology 2002;130(4):1728-38.
2002: Young-Sun Yim; Georgia L Davis; Ngozi A Duru; Theresa A Musket; Eric W Linton; Joachim Messing; Michael D McMullen; Carol Soderlund; Mary L Polacco; Jack M Gardiner; Edward H Coe
Characterization of three maize bacterial artificial chromosome libraries toward anchoring of the physical map to the genetic map using high-density bacterial artificial chromosome filter hybridization.
Plant physiology 2002;130(4):1686-96.
2002: Rentao Song; Joachim Messing
Contiguous genomic DNA sequence comprising the 19-kD zein gene family from maize.
Plant physiology 2002;130(4):1626-35.
2002: Rentao Song; Victor Llaca; Joachim Messing
Mosaic organization of orthologous sequences in grass genomes.
Genome research 2002;12(10):1549-55.
2002: Wonkeun Park; Junjie Li; Rentao Song; Joachim Messing; Xuemei Chen
CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana.
Current biology : CB 2002;12(17):1484-95.
2002: Wusirika Ramakrishna; Jianxin Ma; Phillip SanMiguel; John Emberton; Jorge Dubcovsky; bryan shiloff; Zeyu Jiang; Nils Rostoks; Carlos S Busso; Matthew Ogden; Eric Linton; Andris Kleinhofs; Katrien M Devos; Joachim Messing; Jeffrey L Bennetzen
Frequent genic rearrangements in two regions of grass genomes identified by comparative sequence analysis.
Comparative and functional genomics 2002;3(2):165-6.
2001: Rentao Song; Victor Llaca; Eric Linton; Joachim Messing
Sequence, regulation, and evolution of the maize 22-kD alpha zein gene family.
Genome research 2001;11(11):1817-25.
2001: Joachim Messing
The universal primers and the shotgun DNA sequencing method.
Methods in molecular biology (Clifton, N.J.) 2001;167():13-31.
1999: Joachim Messing; Ueli Grossniklaus
Genomic imprinting in plants.
Results and problems in cell differentiation 1999;25():23-40.
1998: Z Wang; Joachim Messing
Modulation of gene expression by DNA-protein and protein-protein interactions in the promoter region of the zein multigene family.
Gene 1998;223(1-2):333-45.
1998: Z Wang; T Ueda; Joachim Messing
Characterization of the maize prolamin box-binding factor-1 (PBF-1) and its role in the developmental regulation of the zein multigene family.
Gene 1998;223(1-2):321-32.
1998: W Hu; MC Timmermans; Joachim Messing
Interchromosomal recombination in Zea mays.
Genetics 1998;150(3):1229-37.
1998: Victor Llaca; Joachim Messing
Amplicons of maize zein genes are conserved within genic but expanded and constricted in intergenic regions.
The Plant journal : for cell and molecular biology 1998;15(2):211-20.
1998: Joachim Messing; Victor Llaca
Importance of anchor genomes for any plant genome project.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(5):2017-20.
1997: J M Bradeen; MC Timmermans; Joachim Messing
Dynamic genome organization and gene evolution by positive selection in geminivirus (Geminiviridae).
Molecular biology and evolution 1997;14(11):1114-24.
1997: MC Timmermans; O P Das; J M Bradeen; Joachim Messing
Region-specific cis- and trans-acting factors contribute to genetic variability in meiotic recombination in maize.
Genetics 1997;146(3):1101-13.
1996: M C Timmermans; O P Das; Joachim Messing
Characterization of a meiotic crossover in maize identified by a restriction fragment length polymorphism-based method.
Genetics 1996;143(4):1771-83.
1995: S Swarup; M C Timmermans; S Chaudhuri; Joachim Messing
Determinants of the high-methionine trait in wild and exotic germplasm may have escaped selection during early cultivation of maize.
The Plant journal : for cell and molecular biology 1995;8(3):359-68.
1995: L Wu; T Ueda; Joachim Messing
The formation of mRNA 3'-ends in plants.
The Plant journal : for cell and molecular biology 1995;8(3):323-9.
1995: W Hu; O P Das; Joachim Messing
Zeon-1, a member of a new maize retrotransposon family.
Molecular & general genetics : MGG 1995;248(4):471-80.
1995: G Lund; Joachim Messing; Angelo Viotti
Endosperm-specific demethylation and activation of specific alleles of alpha-tubulin genes of Zea mays L.
Molecular & general genetics : MGG 1995;246(6):716-22.
1995: S Chaudhuri; Joachim Messing
RFLP mapping of the maize dzr1 locus, which regulates methionine-rich 10 kDa zein accumulation.
Molecular & general genetics : MGG 1995;246(6):707-15.
1994: L Wu; T Ueda; Joachim Messing
Sequence and spatial requirements for the tissue- and species-independent 3'-end processing mechanism of plant mRNA.
Molecular and cellular biology 1994;14(10):6829-38.
1994: T Ueda; Z Wang; N Pham; Joachim Messing
Identification of a transcriptional activator-binding element in the 27-kilodalton zein promoter, the -300 element.
Molecular and cellular biology 1994;14(7):4350-9.
1994: S Chaudhuri; Joachim Messing
Allele-specific parental imprinting of dzr1, a posttranscriptional regulator of zein accumulation.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(11):4867-71.
1994: O P Das; Joachim Messing
Variegated phenotype and developmental methylation changes of a maize allele originating from epimutation.
Genetics 1994;136(3):1121-41.
1993: L Wu; T Ueda; Joachim Messing
3'-end processing of the maize 27 kDa zein mRNA.
The Plant journal : for cell and molecular biology 1993;4(3):535-44.
1993: T Ueda; Joachim Messing
Manipulation of amino acid balance in maize seeds.
Genetic engineering 1993;15():109-30.
1992: M C Timmermans; O P Das; Joachim Messing
Trans replication and high copy numbers of wheat dwarf virus vectors in maize cells.
Nucleic acids research 1992;20(15):4047-54.
1992: T Ueda; W Waverczak; K Ward; N Sher; M Ketudat; Robert J Schmidt; Joachim Messing
Mutations of the 22- and 27-kD zein promoters affect transactivation by the Opaque-2 protein.
The Plant cell 1992;4(6):701-9.
1992: Richard H. Ebright; Q Dong; Joachim Messing
Corrected nucleotide sequence of M13mp18 gene III.
Gene 1992;114(1):81-3.
1991: O P Das; K Ward; S Ray; Joachim Messing
Sequence variation between alleles reveals two types of copy correction at the 27-kDa zein locus of maize.
Genomics 1991;11(4):849-56.
1991: Gisela Heidecker; S Chaudhuri; Joachim Messing
Highly clustered zein gene sequences reveal evolutionary history of the multigene family.
Genomics 1991;10(3):719-32.
1991: O P Das; E Poliak; K Ward; Joachim Messing
A new allele of the duplicated 27kD zein locus of maize generated by homologous recombination.
Nucleic acids research 1991;19(12):3325-30.
1991: Joachim Messing
Cloning in M13 phage or how to use biology at its best.
Gene 1991;100():3-12.
1991: J Vieira; Joachim Messing
New pUC-derived cloning vectors with different selectable markers and DNA replication origins.
Gene 1991;100():189-94.
1991: M Cruz-Alvarez; J A Kirihara; Joachim Messing
Post-transcriptional regulation of methionine content in maize kernels.
Molecular & general genetics : MGG 1991;225(2):331-9.
1991: M Ugaki; T Ueda; M C Timmermans; J Vieira; keith elliston; Joachim Messing
Replication of a geminivirus derived shuttle vector in maize endosperm cells.
Nucleic acids research 1991;19(2):371-7.
1990: O P Das; S Levi-Minzi; M Koury; M Benner; Joachim Messing
A somatic gene rearrangement contributing to genetic diversity in maize.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(20):7809-13.
1990: M C Timmermans; Pal Maliga; J Vieira; Joachim Messing
The pFF plasmids: cassettes utilising CaMV sequences for expression of foreign genes in plants.
Journal of biotechnology 1990;14(3-4):333-44.
1988: D P Snustad; J P Hunsperger; B M Chereskin; Joachim Messing
Maize glutamine synthetase cDNAs: isolation by direct genetic selection in Escherichia coli.
Genetics 1988;120(4):1111-23.
1988: J A Kirihara; J B Petri; Joachim Messing
Isolation and sequence of a gene encoding a methionine-rich 10-kDa zein protein from maize.
Gene 1988;71(2):359-70.
1988: J A Kirihara; J P Hunsperger; W C Mahoney; Joachim Messing
Differential expression of a gene for a methionine-rich storage protein in maize.
Molecular & general genetics : MGG 1988;211(3):477-84.
1987: O P Das; Joachim Messing
Allelic variation and differential expression at the 27-kilodalton zein locus in maize.
Molecular and cellular biology 1987;7(12):4490-7.
1987: J Vieira; Joachim Messing
Production of single-stranded plasmid DNA.
Methods in enzymology 1987;153():3-11.
1987: Gisela Heidecker; Joachim Messing
A method for cloning full-length cDNA in plasmid vectors.
Methods in enzymology 1987;154():28-41.
1985: S R Ludwig; R F Pohlman; J Vieira; A G Smith; Joachim Messing
The nucleotide sequence of a mitochondrial replicon from maize.
Gene 1985;38(1-3):131-8.
1985: C Yanisch-Perron; J Vieira; Joachim Messing
Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.
Gene 1985;33(1):103-19.
1984: R F Pohlman; N V Fedoroff; Joachim Messing
Correction: nucleotide sequence of Ac.
Cell 1984;39(2 Pt 1):417.
1984: R F Pohlman; N V Fedoroff; Joachim Messing
The nucleotide sequence of the maize controlling element Activator.
Cell 1984;37(2):635-43.
1984: J C Kridl; J Vieira; I Rubenstein; Joachim Messing
Nucleotide sequence analysis of a zein genomic clone with a short open reading frame.
Gene 1984;28(1):113-8.
1983: Gisela Heidecker; Joachim Messing
Sequence analysis of zein cDNAs obtained by an efficient mRNA cloning method.
Nucleic acids research 1983;11(14):4891-906.
1982: Joachim Messing; J Vieira
A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.
Gene 1982;19(3):269-76.
1982: J Vieira; Joachim Messing
The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.
Gene 1982;19(3):259-68.
1982: D E Geraghty; Joachim Messing; I Rubenstein
Sequence analysis and comparison of cDNAs of the zein multigene family .
The EMBO journal 1982;1(11):1329-35.
1982: N T Hu; M A Peifer; Gisela Heidecker; Joachim Messing; I Rubenstein
Primary structure of a genomic zein sequence of maize.
The EMBO journal 1982;1(11):1337-42.
1981: D Geraghty; M A Peifer; I Rubenstein; Joachim Messing
The primary structure of a plant storage protein: zein.
Nucleic acids research 1981;9(19):5163-74.
1980: Gisela Heidecker; Joachim Messing; B Gronenborn
A versatile primer for DNA sequencing in the M13mp2 cloning system.
Gene 1980;10(1):69-73.