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Makedonka Mitreva

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Catherine Lozupone; Susan V Lynch; John Martin; Makedonka Mitreva; Alison Morris; Brent E Palmer; Erica Sodergren; Jesse Stombaugh; Homer Twigg; Luke Ursell; George M Weinstock; Guohui Yao; Vincent Bensan Young; Sahar Abubucker; Gail Ackerman; James M Beck; Frederic D Bushman; Thomas B Campbell; Emily S Charlson; Ronald G Collman; Adela Cota-Gomez; Jeffrey L Curtis; Sonia C Flores; Andrew P Fontenot; Elodie Ghedin; Laurence Huang; Rob Knight; Kenneth S Knox; Derek J Linderman
Widespread Colonization of the Lung by Tropheryma whipplei in HIV Infection.
J De Graef; J Demeler; Edwin Claerebout; Makedonka Mitreva; P Skuce; Jozef Vercruysse; Georg von Samson-Himmelstjerna; Peter Geldhof
Gene expression analysis of ABC transporters in a resistant Cooperia oncophora isolate following in vivo and in vitro exposure to macrocyclic lactones.
Márcio G Pavan; Jennifer Randall-Maher; Sahar Abubucker; Ellen M Dotson; Gena G Lawrence; Cristiano Lazoski; Rafael D Mesquita; Makedonka Mitreva; Fernando A Monteiro
A nuclear single-nucleotide polymorphism (SNP) potentially useful for the separation of Rhodnius prolixus from members of the Rhodnius robustus cryptic species complex (Hemiptera: Reduviidae).

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All Publications

2013: Catherine Lozupone; Susan V Lynch; John Martin; Makedonka Mitreva; Alison Morris; Brent E Palmer; Erica Sodergren; Jesse Stombaugh; Homer Twigg; Luke Ursell; George M Weinstock; Guohui Yao; Vincent Bensan Young; Sahar Abubucker; Gail Ackerman; James M Beck; Frederic D Bushman; Thomas B Campbell; Emily S Charlson; Ronald G Collman; Adela Cota-Gomez; Jeffrey L Curtis; Sonia C Flores; Andrew P Fontenot; Elodie Ghedin; Laurence Huang; Rob Knight; Kenneth S Knox; Derek J Linderman
Widespread Colonization of the Lung by Tropheryma whipplei in HIV Infection.
American journal of respiratory and critical care medicine 2013;187(10):1110-7.
2013: J De Graef; J Demeler; Edwin Claerebout; Makedonka Mitreva; P Skuce; Jozef Vercruysse; Georg von Samson-Himmelstjerna; Peter Geldhof
Gene expression analysis of ABC transporters in a resistant Cooperia oncophora isolate following in vivo and in vitro exposure to macrocyclic lactones.
Parasitology 2013;140(4):499-508.
2013: Márcio G Pavan; Jennifer Randall-Maher; Sahar Abubucker; Ellen M Dotson; Gena G Lawrence; Cristiano Lazoski; Rafael D Mesquita; Makedonka Mitreva; Fernando A Monteiro
A nuclear single-nucleotide polymorphism (SNP) potentially useful for the separation of Rhodnius prolixus from members of the Rhodnius robustus cryptic species complex (Hemiptera: Reduviidae).
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2013;14():426-33.
2013: Samantha N McNulty; Makedonka Mitreva; Gary J Weil; Peter U Fischer
Inter and intra-specific diversity of parasites that cause lymphatic filariasis.
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2013;14():137-46.
2013: Christina M Taylor; Sahar Abubucker; John Martin; Kerrie Powell; Ramakrishna U Rao; Makedonka Mitreva
Using existing drugs as leads for broad spectrum anthelmintics targeting protein kinases.
PLoS pathogens 2013;9(2):e1003149.
2013: Siegfried Schloissnig; Shinichi Sunagawa; Shamil Sunyaev; Julien Tap; Alison Waller; George M Weinstock; Ana Zhu; Karthik Kota; Jens Roat Kultima; John Martin; Daniel R Mende; Makedonka Mitreva; Manimozhiyan Arumugam; Peer Bork
Genomic variation landscape of the human gut microbiome.
Nature 2013;493(7430):45-50.
2013: Esley Heizer; Bruce Rosa; Dante S Zarlenga; Jessie De Graef; Xin Gao; Robin B Gasser; Peter Geldhof; Makedonka Mitreva
Transcriptome analyses reveal protein and domain families that delineate stage-related development in the economically important parasitic nematodes, Ostertagia ostertagi and Cooperia oncophora.
BMC genomics 2013;14():118.
2012: Jianbin Wang; Matthew Berriman; Mark L Blaxter; Georgios Koutsovoulos; Sujai Kumar; Vincent Magrini; Makedonka Mitreva; Alicia Thorne; Richard E Davis
Silencing of germline-expressed genes by DNA elimination in somatic cells.
Developmental cell 2012;23(5):1072-80.
2012: Makedonka Mitreva
The genome of a blood fluke associated with human cancer.
Nature genetics 2012;44(2):116-8.
2012: Ranjeeta Menon; Makedonka Mitreva; Robin B Gasser; Shoba Ranganathan
An analysis of the transcriptome of Teladorsagia circumcincta: its biological and biotechnological implications.
BMC genomics 2012;13 Suppl 7():S10.
2012: Samantha N McNulty; Makedonka Mitreva; Gabriel M Simon; Gary J Weil; Sahar Abubucker; Norbert Brattig; KC Curtis; Kerstin Fischer; Nathan P McNulty; Peter U Fischer
Transcriptomic and proteomic analyses of a Wolbachia-free filarial parasite provide evidence of trans-kingdom horizontal gene transfer.
PloS one 2012;7(9):e45777.
2012: Zhengyuan Wang; Dante Zarlenga; Sahar Abubucker; John Martin; Makedonka Mitreva
Exploring metazoan evolution through dynamic and holistic changes in protein families and domains.
BMC evolutionary biology 2012;12():138.
2012: John Martin; Karthik Kota; Joshua Orvis; Ravi Sanka; Nihar Sheth; Erica Sodergren; Sean Sykes; Zhengyuan Wang; George M Weinstock; Sarah Young; Makedonka Mitreva
Optimizing read mapping to reference genomes to determine composition and species prevalence in microbial communities.
PloS one 2012;7(6):e36427.
2012: Sahar Abubucker; Brandi L Cantarel; Dirk Gevers; Johannes Goll; Bernard Henrissat; Jacques Izard; Scott T Kelley; Barbara A Methé; Makedonka Mitreva; Beltran Rodriguez-Mueller; Patrick D Schloss; Alyxandria M Schubert; Nicola Segata; Mathangi Thiagarajan; Owen R White; Jeremy Zucker; Curtis Huttenhower
Metabolic reconstruction for metagenomic data and its application to the human microbiome.
PLoS computational biology 2012;8(6):e1002358.
2012: Ben-Wen Li; Makedonka Mitreva; Amy C Rush; Zhengyuan Wang; Gary J Weil
Transcription profiling reveals stage- and function-dependent expression patterns in the filarial nematode Brugia malayi.
BMC genomics 2012;13():184.
2012: Ramakrishna U Rao; Sahar Abubucker; Seth D Crosby; Michael Heinz; Yuefang Huang; Makedonka Mitreva; Gary J Weil
Effects of doxycycline on gene expression in Wolbachia and Brugia malayi adult female worms in vivo.
Journal of biomedical science 2012;19():21.
2011: Hanns Soblik; Hanno Steen; Abuelhassan Elshazly Younis; Frank Geisinger; Marc Kirchner; Makedonka Mitreva; Bernhard Y Renard; Norbert W Brattig
Life cycle stage-resolved proteomic analysis of the excretome/secretome from Strongyloides ratti--identification of stage-specific proteases.
Molecular & cellular proteomics : MCP 2011;10(12):M111.010157.
2011: Abuelhassan Elshazly Younis; Irene Ajonina-Ekoti; Klaus D Erttmann; Frank Geisinger; Eva Liebau; Makedonka Mitreva; Markus Perbandt; Hanns Soblik; Hanno Steen; Norbert W Brattig
Stage-specific excretory-secretory small heat shock proteins from the parasitic nematode Strongyloides ratti--putative links to host's intestinal mucosal defense system.
The FEBS journal 2011;278(18):3319-36.
2011: Jianbin Wang; Amanda Crunk; Benjamin Czech; Gregory J Hannon; Makedonka Mitreva; Adam Wallace; Richard E Davis
Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles.
Genome research 2011;21(9):1462-77.
2011: Johnathan J Dalzell; Tim A Day; Colin C Fleming; Nikki J Marks; Paul McVeigh; Makedonka Mitreva; Angela Mousley; Neil D Warnock; Pierre Abad; David McK Bird; Aaron G Maule
RNAi effector diversity in nematodes.
PLoS neglected tropical diseases 2011;5(6):e1176.
2011: Cinzia Cantacessi; Robin Gasser; Christina Strube; Thomas Schnieder; Aaron R Jex; Ross S Hall; Bronwyn E Campbell; Neil D Young; Shoba Ranganathan; Paul W Sternberg; Makedonka Mitreva
Deep insights into Dictyocaulus viviparus transcriptomes provides unique prospects for new drug targets and disease intervention.
Biotechnology advances 2011;29(3):261-71.
2011: Makedonka Mitreva; Douglas P Jasmer; Dante S Zarlenga; Zhengyuan Wang; Sahar Abubucker; John Martin; Christina M Taylor; Yong Yin; Lucinda Fulton; Pat Minx; Shiaw-Pyng Yang; Wesley C Warren; Robert S Fulton; Veena Bhonagiri; Xu Zhang; Kym Hallsworth-Pepin; Sandra W Clifton; James P McCarter; Judith Appleton; Elaine R Mardis; Richard K Wilson
The draft genome of the parasitic nematode Trichinella spiralis.
Nature genetics 2011;43(3):228-35.
2011: Christina M Taylor; Kerstin Fischer; Sahar Abubucker; Zhengyuan Wang; John Martin; Daojun Jiang; Marc Magliano; Marie-Noëlle Rosso; Ben-Wen Li; Peter U Fischer; Makedonka Mitreva
Targeting protein-protein interactions for parasite control.
PloS one 2011;6(4):e18381.
2011: Ziping Zhang; Yilei Wang; Shuhong Wang; Jingtao Liu; Wesley Warren; Makedonka Mitreva; Ronald B Walter
Transcriptome analysis of female and male Xiphophorus maculatus Jp 163 A.
PloS one 2011;6(4):e18379.
2011: Liang Ye; George M Weinstock; Richard K Wilson; Lei Chen; David J Dooling; Kevin V Haub; LaDeana W Hillier; Devin P Locke; Elaine R Mardis; John C Martin; Jason R Miller; Patrick J Minx; Makedonka Mitreva; Nay Thane; Wesley C Warren
A vertebrate case study of the quality of assemblies derived from next-generation sequences.
Genome biology 2011;12(3):R31.
2011: Ben-Wen Li; Amy C Rush; Dao-Jun Jiang; Makedonka Mitreva; Sahar Abubucker; Gary J Weil
Gender-associated genes in filarial nematodes are important for reproduction and potential intervention targets.
PLoS neglected tropical diseases 2011;5(1):e947.
2010: Cinzia Cantacessi; Makedonka Mitreva; Bronwyn E Campbell; Ross S Hall; Neil D Young; Aaron R Jex; Shoba Ranganathan; Robin Gasser
First transcriptomic analysis of the economically important parasitic nematode, Trichostrongylus colubriformis, using a next-generation sequencing approach.
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2010;10(8):1199-207.
2010: Makedonka Mitreva; Douglas P Jasmer
Trichinella spiralis: genomic application to control a zoonotic nematode.
Infectious disorders drug targets 2010;10(5):376-84.
2010: Cinzia Cantacessi; Aaron R Jex; Ross S Hall; Neil D Young; Bronwyn E Campbell; Anja Joachim; Matthew J Nolan; Sahar Abubucker; Paul W Sternberg; Shoba Ranganathan; Makedonka Mitreva; Robin Gasser
A practical, bioinformatic workflow system for large data sets generated by next-generation sequencing.
Nucleic acids research 2010;38(17):e171.
2010: Scott M Severance; Abbhirami Rajagopal; Anita U Rao; Gustavo C Cerqueira; Makedonka Mitreva; Najib M El-Sayed; Michael Krause; Iqbal Hamza
Genome-wide analysis reveals novel genes essential for heme homeostasis in Caenorhabditis elegans.
PLoS genetics 2010;6(7):e1001044.
2010: yu hao; Rafael Montiel; Sahar Abubucker; Makedonka Mitreva; Nelson Simões
Transcripts analysis of the entomopathogenic nematode Steinernema carpocapsae induced in vitro with insect haemolymph.
Molecular and biochemical parasitology 2010;169(2):79-86.
2010: Camilla M Whittington; Anthony T Papenfuss; Devin P Locke; Elaine R Mardis; Richard K Wilson; Sahar Abubucker; Makedonka Mitreva; Emily S W Wong; Arthur L Hsu; Philip W Kuchel; Katherine Belov; Wesley C Warren
Novel venom gene discovery in the platypus.
Genome biology 2010;11(9):R95.
2010: Xin Gao; Zhengyuan Wang; John Martin; Sahar Abubucker; Xu Zhang; Makedonka Mitreva; John M Hawdon
Identification of hookworm DAF-16/FOXO response elements and direct gene targets.
PloS one 2010;5(8):e12289.
2010: Samantha N McNulty; Jeremy M Foster; Makedonka Mitreva; Julie C Hotopp; John Martin; Kerstin Fischer; Bo Wu; Paul J Davis; Sanjay Kumar; Norbert W Brattig; Barton E Slatko; Gary J Weil; Peter U Fischer
Endosymbiont DNA in endobacteria-free filarial nematodes indicates ancient horizontal genetic transfer.
PloS one 2010;5(6):e11029.
2010: Cinzia Cantacessi; Makedonka Mitreva; Aaron R Jex; Neil D Young; Bronwyn E Campbell; Ross S Hall; Maria A Doyle; Stuart A Ralph; Elida M Rabelo; Shoba Ranganathan; Paul W Sternberg; Alex Loukas; Robin Gasser
Massively parallel sequencing and analysis of the Necator americanus transcriptome.
PLoS neglected tropical diseases 2010;4(5):e684.
2010: Zhengyuan Wang; Sahar Abubucker; John Martin; Richard K Wilson; John Hawdon; Makedonka Mitreva
Characterizing Ancylostoma caninum transcriptome and exploring nematode parasitic adaptation.
BMC genomics 2010;11():307.
2009: Annelies Haegeman; Joachim Jacob; Bartel Vanholme; Tina Kyndt; Makedonka Mitreva; Godelieve Gheysen
Expressed sequence tags of the peanut pod nematode Ditylenchus africanus: the first transcriptome analysis of an Anguinid nematode.
Molecular and biochemical parasitology 2009;167(1):32-40.
2009: Sahar Abubucker; Dante S Zarlenga; John Martin; Yong Yin; Zhengyuan Wang; James P McCarter; Louis Gasbarree; Richard K Wilson; Makedonka Mitreva
The transcriptomes of the cattle parasitic nematode Ostertagia ostartagi.
Veterinary parasitology 2009;162(1-2):89-99.
2009: Paul J Brindley; Makedonka Mitreva; Elodie Ghedin; Sara Lustigman
Helminth genomics: The implications for human health.
PLoS neglected tropical diseases 2009;3(10):e538.
2009: Benwen Li; Amy C Rush; Makedonka Mitreva; Yong Yin; David Spiro; Elodie Ghedin; Gary J Weil
Transcriptomes and pathways associated with infectivity, survival and immunogenicity in Brugia malayi L3.
BMC genomics 2009;10():267.
2009: Yong Yin; John Martin; Sahar Abubucker; Zhengyuan Wang; Lucjan Wyrwicz; Leszek Rychlewski; James P McCarter; Richard K Wilson; Makedonka Mitreva
Molecular determinants archetypical to the phylum Nematoda.
BMC genomics 2009;10():114.
2009: Sandra W Clifton; Makedonka Mitreva
Strategies for undertaking expressed sequence tag (EST) projects.
Methods in molecular biology (Clifton, N.J.) 2009;533():13-32.
2009: Makedonka Mitreva; Elaine R Mardis
Large-scale sequencing and analytical processing of ESTs.
Methods in molecular biology (Clifton, N.J.) 2009;533():153-87.
2009: Makedonka Mitreva; Geert Smant; Johannes Helder
Role of horizontal gene transfer in the evolution of plant parasitism among nematodes.
Methods in molecular biology (Clifton, N.J.) 2009;532():517-35.
2009: Axel A Elling; Makedonka Mitreva; Xiaowu Gai; John Martin; Justin Recknor; Eric L Davis; Richard S Hussey; Dan Nettleton; James P McCarter; Thomas J Baum
Sequence mining and transcript profiling to explore cyst nematode parasitism.
BMC genomics 2009;10():58.
2009: Zhengyuan Wang; John Martin; Sahar Abubucker; Yong Yin; Robin B Gasser; Makedonka Mitreva
Systematic analysis of insertions and deletions specific to nematode proteins and their proposed functional and evolutionary relevance.
BMC evolutionary biology 2009;9():23.
2008: Christoph Dieterich; Sandra W Clifton; Lisa N Schuster; Asif Chinwalla; Kimberly Delehaunty; Iris Dinkelacker; Lucinda Fulton; Robert Fulton; Jennifer Godfrey; Pat Minx; Makedonka Mitreva; Waltraud Roeseler; Huiyu Tian; Hanh Witte; Shiaw-Pyng Yang; Richard K Wilson; Ralf J Sommer
The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism.
Nature genetics 2008;40(10):1193-8.
2008: Makedonka Mitreva; Douglas P Jasmer
Advances in the sequencing of the genome of the adenophorean nematode Trichinella spiralis.
Parasitology 2008;135(8):869-80.
2008: Joachim Jacob; Makedonka Mitreva; Bartel Vanholme; Godelieve Gheysen
Exploring the transcriptome of the burrowing nematode Radopholus similis.
Molecular genetics and genomics : MGG 2008;280(1):1-17.
2008: Sahar Abubucker; John Martin; Yong Yin; Lucinda Fulton; Shiaw-Pyng Yang; Kym Hallsworth-Pepin; J Spencer Johnston; John M Hawdon; James P McCarter; Richard K Wilson; Makedonka Mitreva
The canine hookworm genome: analysis and classification of Ancylostoma caninum survey sequences.
Molecular and biochemical parasitology 2008;157(2):187-92.
2008: Todd Wylie; John Martin; Sahar Abubucker; Yong Yin; David Messina; Zhengyuan Wang; James P McCarter; Makedonka Mitreva
NemaPath: online exploration of KEGG-based metabolic pathways for nematodes.
BMC genomics 2008;9():525.
2008: Erwin Roze; Bram Hanse; Makedonka Mitreva; Bartel Vanholme; Jaap Bakker; Geert Smant
Mining the secretome of the root-knot nematode Meloidogyne chitwoodi for candidate parasitism genes.
Molecular plant pathology 2008;9(1):1-10.
2008: Yong Yin; John Martin; Sahar Abubucker; Alan L Scott; James P McCarter; Richard K Wilson; Douglas P Jasmer; Makedonka Mitreva
Intestinal transcriptomes of nematodes: comparison of the parasites Ascaris suum and Haemonchus contortus with the free-living Caenorhabditis elegans.
PLoS neglected tropical diseases 2008;2(8):e269.
2007: Makedonka Mitreva; Dante S Zarlenga; James P McCarter; Douglas P Jasmer
Parasitic nematodes - from genomes to control.
Veterinary parasitology 2007;148(1):31-42.
2007: Thewarach Laha; Alex Loukas; Supatra Wattanasatitarpa; Jenjira Somprakhon; Nonglack Kewgrai; Paiboon Sithithaworn; Sasithorn Kaewkes; Makedonka Mitreva; Paul J Brindley
The bandit, a new DNA transposon from a hookworm-possible horizontal genetic transfer between host and parasite.
PLoS neglected tropical diseases 2007;1(1):e35.
2007: Axel A Elling; Makedonka Mitreva; Justin Recknor; Xiaowu Gai; John Martin; Thomas R Maier; Jeff McDermott; Tarek Hewezi; David McK Bird; Eric L Davis; Richard S Hussey; Dan Nettleton; James P McCarter; Thomas J Baum
Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines.
Genome biology 2007;8(10):R211.
2006: Benwen Li; Amy C Rush; Gary J Weil; James P McCarter; Makedonka Mitreva
Brugia malayi: effects of radiation and culture on gene expression in infective larvae.
Molecular and biochemical parasitology 2006;149(2):201-7.
2006: Yong Yin; John Martin; James P McCarter; Sandra W Clifton; Richard K Wilson; Makedonka Mitreva
Identification and analysis of genes expressed in the adult filarial parasitic nematode Dirofilaria immitis.
International journal for parasitology 2006;36(7):829-39.
2006: Bartel Vanholme; Makedonka Mitreva; Wim van Criekinge; Marc Logghe; David Bird; James P McCarter; Godelieve Gheysen
Detection of putative secreted proteins in the plant-parasitic nematode Heterodera schachtii.
Parasitology research 2006;98(5):414-24.
2006: Makedonka Mitreva; Douglas P Jasmer
Biology and genome of Trichinella spiralis.
WormBook : the online review of C. elegans biology 2006;():1-21.
2006: Teun W J M van Herpen; Svetlana V Goryunova; Johanna van der Schoot; Makedonka Mitreva; Elma Salentijn; Oscar Vorst; Martijn F Schenk; Peter van Veelen; Frits Koning; Loek J M van Soest; Ben Vosman; Dirk Bosch; Rob J Hamer; Luud J W J Gilissen; Marinus Smulders
Alpha-gliadin genes from the A, B, and D genomes of wheat contain different sets of celiac disease epitopes.
BMC genomics 2006;7():1.
2005: James P McCarter; David McK Bird; Makedonka Mitreva
Nematode gene sequences: update for december 2005.
Journal of nematology 2005;37(4):417-21.
2005: David McK Bird; Mark L Blaxter; James P McCarter; Makedonka Mitreva; Paul W Sternberg; W Kelley Thomas
A white paper on nematode comparative genomics.
Journal of nematology 2005;37(4):408-16.
2005: Makedonka Mitreva; Mark Blaxter; David McK Bird; James P McCarter
Comparative genomics of nematodes.
Trends in genetics : TIG 2005;21(10):573-81.
2005: Makedonka Mitreva; Judith Appleton; James P McCarter; Douglas P Jasmer
Expressed sequence tags from life cycle stages of Trichinella spiralis: application to biology and parasite control.
Veterinary parasitology 2005;132(1-2):13-7.
2005: Benwen Li; Amy C Rush; Seth Crosby; Wesley C Warren; Steven A Williams; Makedonka Mitreva; Gary J Weil
Profiling of gender-regulated gene transcripts in the filarial nematode Brugia malayi by cDNA oligonucleotide array analysis.
Molecular and biochemical parasitology 2005;143(1):49-57.
2005: Fiona J Thompson; Makedonka Mitreva; Gary L A Barker; John Martin; Robert H Waterston; Robert H Waterson; James P McCarter; Mark E Viney
An expressed sequence tag analysis of the life-cycle of the parasitic nematode Strongyloides ratti.
Molecular and biochemical parasitology 2005;142(1):32-46.
2005: Makedonka Mitreva; James P McCarter; Prema Arasu; John M Hawdon; John Martin; Mike Dante; Todd Wylie; Jian Xu; Jason E Stajich; Wadim Kapulkin; Sandra W Clifton; Robert H Waterston; Richard K Wilson
Investigating hookworm genomes by comparative analysis of two Ancylostoma species.
BMC genomics 2005;6():58.
2004: John Parkinson; Makedonka Mitreva; Claire Whitton; Marian Thomson; Jennifer Daub; John Martin; Ralf Schmid; Neil Hall; Bart Barrell; Robert H Waterston; James P McCarter; Mark Blaxter
A transcriptomic analysis of the phylum Nematoda.
Nature genetics 2004;36(12):1259-67.
2004: Douglas P Jasmer; Makedonka Mitreva; James P McCarter
mRNA sequences for Haemonchus contortus intestinal cathepsin B-like cysteine proteases display an extreme in abundance and diversity compared with other adult mammalian parasitic nematodes.
Molecular and biochemical parasitology 2004;137(2):297-305.
2004: Makedonka Mitreva; Douglas P Jasmer; Judith Appleton; John Martin; Mike Dante; Todd Wylie; Sandra W Clifton; Robert H Waterston; James P McCarter
Gene discovery in the adenophorean nematode Trichinella spiralis: an analysis of transcription from three life cycle stages.
Molecular and biochemical parasitology 2004;137(2):277-91.
2004: Makedonka Mitreva; Axel A Elling; Mike Dante; A P Kloek; Anantharaman Kalyanaraman; Srinivas Aluru; Sandra W Clifton; David McK Bird; Thomas J Baum; James P McCarter
A survey of SL1-spliced transcripts from the root-lesion nematode Pratylenchus penetrans.
Molecular genetics and genomics : MGG 2004;272(2):138-48.
2004: Makedonka Mitreva; James P McCarter; John Martin; Mike Dante; Todd Wylie; Brandi J Chiapelli; Deana Pape; Sandra W Clifton; Thomas B Nutman; Robert H Waterston
Comparative genomics of gene expression in the parasitic and free-living nematodes Strongyloides stercoralis and Caenorhabditis elegans.
Genome research 2004;14(2):209-20.
2004: Todd Wylie; John C Martin; Mike Dante; Makedonka Mitreva; Sandra W Clifton; Asif T Chinwalla; Robert H Waterston; Richard K Wilson; James P McCarter
Nematode.net: a tool for navigating sequences from parasitic and free-living nematodes.
Nucleic acids research 2004;32(Database issue):D423-6.
2003: James P McCarter; Makedonka Mitreva; Sandra W Clifton; David McK Bird; Robert H Waterston
Nematode gene sequences: update for december 2003.
Journal of nematology 2003;35(4):465-9.
2003: John Parkinson; Makedonka Mitreva; Neil Hall; Mark Blaxter; James P McCarter
400000 nematode ESTs on the Net.
Trends in parasitology 2003;19(7):283-6.
2003: James P McCarter; Makedonka Mitreva; John Martin; Mike Dante; Todd Wylie; Uma Rao; Deana Pape; Yvette Bowers; Brenda Theising; Claire V Murphy; Andrew P Kloek; Brandi J Chiapelli; Sandra W Clifton; David McK Bird; Robert H Waterston
Analysis and functional classification of transcripts from the nematode Meloidogyne incognita.
Genome biology 2003;4(4):R26.