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Outi Monni
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Research Profile (preview)
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Physiology
Phenomena
Chemicals & Drugs
Anatomy
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Network (preview)
21
Knuutila, Sakari
16
Kallioniemi, Anne
13
Kallioniemi, Olli
9
Joensuu, Heikki
9
Hautaniemi, Sampsa
8
Franssila, Kaarle
8
Kokkola, Arto
6
El-Rifai, Wa'el
6
Zhu, Ying
6
Mousses, Spyro
6
Puolakkainen, Pauli
5
Sauter, Guido
5
Autio, Reija
5
Kauraniemi, Päivikki
5
Larramendy, Marcelo
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Geonetwork of Outi Monni (preview)
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All Publications
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2010: Junnila Siina; Kokkola Arto; Mizuguchi Toru; Hirata Koichi; Karjalainen-Lindsberg Marja-Liisa; Puolakkainen Pauli; Monni Outi
Gene expression analysis identifies over-expression of CXCL1, SPARC, SPP1, and SULF1 in gastric cancer.
Genes, chromosomes & cancer 2010;49(1):28-39.
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2009: Mäkitie Antti A; Monni Outi
Molecular profiling of laryngeal cancer.
Expert review of anticancer therapy 2009;9(9):1251-60.
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2009: Thiel Alexandra; Ganesan Aparna; Mrena Johanna; Junnila Siina; Nykänen Antti; Hemmes Annabrita; Tai Hsin-Hsiung; Monni Outi; Kokkola Arto; Haglund Caj; Petrova Tatiana V; Ristimäki Ari
15-hydroxyprostaglandin dehydrogenase is down-regulated in gastric cancer.
Clinical cancer research : an official journal of the American Association for Cancer Research 2009;15(14):4572-80.
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2008: Myllykangas Samuel; Junnila Siina; Kokkola Arto; Autio Reija; Scheinin Ilari; Kiviluoto Tuula; Karjalainen-Lindsberg Marja-Liisa; Hollmén Jaakko; Knuutila Sakari; Puolakkainen Pauli; Monni Outi
Integrated gene copy number and expression microarray analysis of gastric cancer highlights potential target genes.
International journal of cancer. Journal international du cancer 2008;123(4):817-25.
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2008: Järvinen Anna-Kaarina; Autio Reija; Kilpinen Sami; Saarela Matti; Leivo Ilmo; Grénman Reidar; Mäkitie Antti A; Monni Outi
High-resolution copy number and gene expression microarray analyses of head and neck squamous cell carcinoma cell lines of tongue and larynx.
Genes, chromosomes & cancer 2008;47(6):500-9.
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2008: Heinonen Henna; Nieminen Anni; Saarela Matti; Kallioniemi Anne; Klefström Juha; Hautaniemi Sampsa; Monni Outi
Deciphering downstream gene targets of PI3K/mTOR/p70S6K pathway in breast cancer.
BMC genomics 2008;9():348.
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2006: Järvinen A-K; Autio R; Haapa-Paananen S; Wolf M; Saarela M; Grénman R; Leivo I; Kallioniemi O; Mäkitie A A; Monni O
Identification of target genes in laryngeal squamous cell carcinoma by high-resolution copy number and gene expression microarray analyses.
Oncogene 2006;25(52):6997-7008.
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2006: Harjunpää Antti; Taskinen Minna; Nykter Matti; Karjalainen-Lindsberg Marja-Liisa; Nyman Heidi; Monni Outi; Hemmer Samuli; Yli-Harja Olli; Hautaniemi Sampsa; Meri Seppo; Leppä Sirpa
Differential gene expression in non-malignant tumour microenvironment is associated with outcome in follicular lymphoma patients treated with rituximab and CHOP.
British journal of haematology 2006;135(1):33-42.
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2006: Skotheim Rolf I; Autio Reija; Lind Guro E; Kraggerud Sigrid M; Andrews Peter W; Monni Outi; Kallioniemi Olli; Lothe Ragnhild A
Novel genomic aberrations in testicular germ cell tumors by array-CGH, and associated gene expression changes.
Cellular oncology : the official journal of the International Society for Cellular Oncology 2006;28(5-6):315-26.
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2005: Skotheim Rolf I; Lind Guro E; Monni Outi; Nesland Jahn M; Abeler Vera M; Fosså Sophie D; Duale Nur; Brunborg Gunnar; Kallioniemi Olli; Andrews Peter W; Lothe Ragnhild A
Differentiation of human embryonal carcinomas in vitro and in vivo reveals expression profiles relevant to normal development.
Cancer research 2005;65(13):5588-98.
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2005: Atiye Jassu; Wolf Maija; Kaur Sippy; Monni Outi; Böhling Tom; Kivioja Aarne; Tas Eva; Serra Massimo; Tarkkanen Maija; Knuutila Sakari
Gene amplifications in osteosarcoma-CGH microarray analysis.
Genes, chromosomes & cancer 2005;42(2):158-63.
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2004: Mahlamäki Eija H; Kauraniemi Päivikki; Monni Outi; Wolf Maija; Hautaniemi Sampsa; Kallioniemi Anne
High-resolution genomic and expression profiling reveals 105 putative amplification target genes in pancreatic cancer.
Neoplasia (New York, N.Y.) 2004;6(5):432-9.
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2004: Myllykangas Samuel; Monni Outi; Nagy Bálint; Rautelin Hilpi; Knuutila Sakari
Helicobacter pylori infection activates FOS and stress-response genes and alters expression of genes in gastric cancer-specific loci.
Genes, chromosomes & cancer 2004;40(4):334-41.
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2004: Järvinen Anna-Kaarina; Hautaniemi Sampsa; Edgren Henrik; Auvinen Petri; Saarela Janna; Kallioniemi Olli-P; Monni Outi
Are data from different gene expression microarray platforms comparable?
Genomics 2004;83(6):1164-8.
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2004: Wolf Maija; Mousses Spyro; Hautaniemi Sampsa; Karhu Ritva; Huusko Pia; Allinen Minna; Elkahloun Abdel; Monni Outi; Chen Yidong; Kallioniemi Anne; Kallioniemi Olli-P
High-resolution analysis of gene copy number alterations in human prostate cancer using CGH on cDNA microarrays: impact of copy number on gene expression.
Neoplasia (New York, N.Y.) 2004;6(3):240-7.
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2004: Kauraniemi Päivikki; Hautaniemi Sampsa; Autio Reija; Astola Jaakko; Monni Outi; Elkahloun Abdel; Kallioniemi Anne
Effects of Herceptin treatment on global gene expression patterns in HER2-amplified and nonamplified breast cancer cell lines.
Oncogene 2004;23(4):1010-3.
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2003: Skotheim Rolf I; Kallioniemi Anne; Bjerkhagen Bodil; Mertens Fredrik; Brekke Helge R; Monni Outi; Mousses Spyro; Mandahl Nils; Soeter Gunnar; Nesland Jahn M; Smeland Sigbjørn; Kallioniemi Olli-P; Lothe Ragnhild A
Topoisomerase-II alpha is upregulated in malignant peripheral nerve sheath tumors and associated with clinical outcome.
Journal of clinical oncology : official journal of the American Society of Clinical Oncology 2003;21(24):4586-91.
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2003: Hautaniemi Sampsa; Edgren Henrik; Vesanen Petri; Wolf Maija; Järvinen Anna-Kaarina; Yli-Harja Olli; Astola Jaakko; Kallioniemi Olli; Monni Outi
A novel strategy for microarray quality control using Bayesian networks.
Bioinformatics (Oxford, England) 2003;19(16):2031-8.
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2002: Bärlund Maarit; Monni Outi; Weaver J Donald; Kauraniemi Päivikki; Sauter Guido; Heiskanen Mervi; Kallioniemi Olli-P; Kallioniemi Anne
Cloning of BCAS3 (17q23) and BCAS4 (20q13) genes that undergo amplification, overexpression, and fusion in breast cancer.
Genes, chromosomes & cancer 2002;35(4):311-7.
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2002: Hyman Elizabeth; Kauraniemi Päivikki; Hautaniemi Sampsa; Wolf Maija; Mousses Spyro; Rozenblum Ester; Ringnér Markus; Sauter Guido; Monni Outi; Elkahloun Abdel; Kallioniemi Olli-P; Kallioniemi Anne
Impact of DNA amplification on gene expression patterns in breast cancer.
Cancer research 2002;62(21):6240-5.
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2002: Andersen Claus L; Monni Outi; Wagner Urs; Kononen Juha; Bärlund Maarit; Bucher Christoph; Haas Philippe; Nocito Antonio; Bissig Heidi; Sauter Guido; Kallioniemi Anne
High-throughput copy number analysis of 17q23 in 3520 tissue specimens by fluorescence in situ hybridization to tissue microarrays.
The American journal of pathology 2002;161(1):73-9.
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2002: Varis Asta; Wolf Maija; Monni Outi; Vakkari Marja-Leena; Kokkola Arto; Moskaluk Chris; Frierson Henry; Powell Steven M; Knuutila Sakari; Kallioniemi Anne; El-Rifai Wa'el
Targets of gene amplification and overexpression at 17q in gastric cancer.
Cancer research 2002;62(9):2625-9.
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2002: Skotheim Rolf I; Monni Outi; Mousses Spyro; Fosså Sophie D; Kallioniemi Olli-P; Lothe Ragnhild A; Kallioniemi Anne
New insights into testicular germ cell tumorigenesis from gene expression profiling.
Cancer research 2002;62(8):2359-64.
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2002: Monni Outi; Hautaniemi Sampsa; Kallioniemi Olli
[Gene chip technique and associated bioinformatics]
Duodecim; lääketieteellinen aikakauskirja 2002;118(11):1157-66.
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2001: Kauraniemi P; Bärlund M; Monni O; Kallioniemi A
New amplified and highly expressed genes discovered in the ERBB2 amplicon in breast cancer by cDNA microarrays.
Cancer research 2001;61(22):8235-40.
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2001: Monni O; Hyman E; Mousses S; Barlund M; Kallioniemi A; Kallioniemi O P
From chromosomal alterations to target genes for therapy: integrating cytogenetic and functional genomic views of the breast cancer genome.
Seminars in cancer biology 2001;11(5):395-401.
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2001: Rantanen S; Monni O; Joensuu H; Franssila K; Knuutila S
Causes and consequences of BCL2 overexpression in diffuse large B-cell lymphoma.
Leukemia & lymphoma 2001;42(5):1089-98.
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2001: Monni O; Barlund M; Mousses S; Kononen J; Sauter G; Heiskanen M; Paavola P; Avela K; Chen Y; Bittner M L; Kallioniemi A
Comprehensive copy number and gene expression profiling of the 17q23 amplicon in human breast cancer.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(10):5711-6.
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2001: Zhu Y; Loukola A; Monni O; Kuokkanen K; Franssila K; Elonen E; Vilpo J; Joensuu H; Kere J; Aaltonen L; Knuutila S
PPP2R1B gene in chronic lymphocytic leukemias and mantle cell lymphomas.
Leukemia & lymphoma 2001;41(1-2):177-83.
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2001: Monni O; Knuutila S
11q deletions in hematological malignancies.
Leukemia & lymphoma 2001;40(3-4):259-66.
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2000: Bärlund M; Monni O; Kononen J; Cornelison R; Torhorst J; Sauter G; Kallioniemi OLLI-P; Kallioniemi A
Multiple genes at 17q23 undergo amplification and overexpression in breast cancer.
Cancer research 2000;60(19):5340-4.
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2000: Zhu Y; Monni O; Franssila K; Elonen E; Vilpo J; Joensuu H; Knuutila S
Deletions at 11q23 in different lymphoma subtypes.
Haematologica 2000;85(9):908-12.
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2000: Forozan F; Mahlamäki E H; Monni O; Chen Y; Veldman R; Jiang Y; Gooden G C; Ethier S P; Kallioniemi A; Kallioniemi O P
Comparative genomic hybridization analysis of 38 breast cancer cell lines: a basis for interpreting complementary DNA microarray data.
Cancer research 2000;60(16):4519-25.
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1999: Knuutila S; Aalto Y; Autio K; Björkqvist A M; El-Rifai W; Hemmer S; Huhta T; Kettunen E; Kiuru-Kuhlefelt S; Larramendy M L; Lushnikova T; Monni O; Pere H; Tapper J; Tarkkanen M; Varis A; Wasenius V M; Wolf M; Zhu Y
DNA copy number losses in human neoplasms.
The American journal of pathology 1999;155(3):683-94.
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1999: Monni O; Franssila K; Joensuu H; Knuutila S
BCL2 overexpression in diffuse large B-cell lymphoma.
Leukemia & lymphoma 1999;34(1-2):45-52.
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1999: Zhu Y; Monni O; El-Rifai W; Siitonen S M; Vilpo L; Vilpo J; Knuutila S
Discontinuous deletions at 11q23 in B cell chronic lymphocytic leukemia.
Leukemia : official journal of the Leukemia Society of America, Leukemia Research Fund, U.K 1999;13(5):708-12.
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1999: Monni O; Zhu Y; Franssila K; Oinonen R; Höglund P; Elonen E; Joensuu H; Knuutila S
Molecular characterization of deletion at 11q22.1-23.3 in mantle cell lymphoma.
British journal of haematology 1999;104(4):665-71.
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1999: Vidgren V; Varis A; Kokkola A; Monni O; Puolakkainen P; Nordling S; Forozan F; Kallioniemi A; Vakkari M L; Kivilaakso E; Knuutila S
Concomitant gastrin and ERBB2 gene amplifications at 17q12-q21 in the intestinal type of gastric cancer.
Genes, chromosomes & cancer 1999;24(1):24-9.
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1998: Kokkola A; Monni O; Puolakkainen P; Nordling S; Haapiainen R; Kivilaakso E; Knuutila S
Presence of high-level DNA copy number gains in gastric carcinoma and severely dysplastic adenomas but not in moderately dysplastic adenomas.
Cancer genetics and cytogenetics 1998;107(1):32-6.
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1998: Larramendy M L; el-Rifai W; Kokkola A; Puolakkainen P; Monni O; Salovaara R; Aarnio M; Knuutila S
Comparative genomic hybridization reveals differences in DNA copy number changes between sporadic gastric carcinomas and gastric carcinomas from patients with hereditary nonpolyposis colorectal cancer.
Cancer genetics and cytogenetics 1998;106(1):62-5.
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1998: Saharinen J; Taipale J; Monni O; Keski-Oja J
Identification and characterization of a new latent transforming growth factor-beta-binding protein, LTBP-4.
The Journal of biological chemistry 1998;273(29):18459-69.
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1998: Knuutila S; Björkqvist A M; Autio K; Tarkkanen M; Wolf M; Monni O; Szymanska J; Larramendy M L; Tapper J; Pere H; El-Rifai W; Hemmer S; Wasenius V M; Vidgren V; Zhu Y
DNA copy number amplifications in human neoplasms: review of comparative genomic hybridization studies.
The American journal of pathology 1998;152(5):1107-23.
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1998: Monni O; Oinonen R; Elonen E; Franssila K; Teerenhovi L; Joensuu H; Knuutila S
Gain of 3q and deletion of 11q22 are frequent aberrations in mantle cell lymphoma.
Genes, chromosomes & cancer 1998;21(4):298-307.
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1998: Knuutila S; Armengol G; Björkqvist A M; el-Rifai W; Larramendy M L; Monni O; Szymanska J
Comparative genomic hybridization study on pooled DNAs from tumors of one clinical-pathological entity.
Cancer genetics and cytogenetics 1998;100(1):25-30.
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1997: Kokkola A; Monni O; Puolakkainen P; Larramendy M L; Victorzon M; Nordling S; Haapiainen R; Kivilaakso E; Knuutila S
17q12-21 amplicon, a novel recurrent genetic change in intestinal type of gastric carcinoma: a comparative genomic hybridization study.
Genes, chromosomes & cancer 1997;20(1):38-43.
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1997: Monni O; Joensuu H; Franssila K; Klefstrom J; Alitalo K; Knuutila S
BCL2 overexpression associated with chromosomal amplification in diffuse large B-cell lymphoma.
Blood 1997;90(3):1168-74.
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1997: Wasenius V M; Jekunen A; Monni O; Joensuu H; Aebi S; Howell S B; Knuutila S
Comparative genomic hybridization analysis of chromosomal changes occurring during development of acquired resistance to cisplatin in human ovarian carcinoma cells.
Genes, chromosomes & cancer 1997;18(4):286-91.
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1996: Monni O; Joensuu H; Franssila K; Knuutila S
DNA copy number changes in diffuse large B-cell lymphoma--comparative genomic hybridization study.
Blood 1996;87(12):5269-78.
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