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Zarmik Moqtaderi

Research Profile

Living Beings

Saccharomyces cerevisiae

Chemicals & Drugs

Physiology

Procedures

Chromatin Immunoprecipitation

Genes & Molecular Sequences

Genes, Fungal

Co-author Network

Publications

TOP 3
Koon Ho Wong; Yi jin; Zarmik Moqtaderi
Multiplex Illumina sequencing using DNA barcoding.
Matthew F Barber; Kaifu Chen; Benjamin A Garcia; Or Gozani; Mitomu Kioi; Wei Li; Eriko Michishita-Kioi; Zarmik Moqtaderi; Silvana Paredes; Kevin Struhl; Luisa Tasselli; Ruth I Tennen; Yuanxin Xi; Nicolas L Young; Katrin F Chua
SIRT7 links H3K18 deacetylation to maintenance of oncogenic transformation.
Anders Esberg; Xiaochun Fan; Jian Lu; Zarmik Moqtaderi; Kevin Struhl; Anders S Byström
Iwr1 protein is important for preinitiation complex formation by all three nuclear RNA polymerases in Saccharomyces cerevisiae.

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All Publications

2013: Koon Ho Wong; Yi jin; Zarmik Moqtaderi
Multiplex Illumina sequencing using DNA barcoding.
Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] 2013;Chapter 7():Unit 7.11..
2012: Matthew F Barber; Kaifu Chen; Benjamin A Garcia; Or Gozani; Mitomu Kioi; Wei Li; Eriko Michishita-Kioi; Zarmik Moqtaderi; Silvana Paredes; Kevin Struhl; Luisa Tasselli; Ruth I Tennen; Yuanxin Xi; Nicolas L Young; Katrin F Chua
SIRT7 links H3K18 deacetylation to maintenance of oncogenic transformation.
Nature 2012;487(7405):114-8.
2011: Anders Esberg; Xiaochun Fan; Jian Lu; Zarmik Moqtaderi; Kevin Struhl; Anders S Byström
Iwr1 protein is important for preinitiation complex formation by all three nuclear RNA polymerases in Saccharomyces cerevisiae.
PloS one 2011;6(6):e20829.
2010: George Locke; Denis Tolkunov; Zarmik Moqtaderi; Kevin Struhl; Alexandre V Morozov
High-throughput sequencing reveals a simple model of nucleosome energetics.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(49):20998-1003.
2010: Xiaochun Fan; Zarmik Moqtaderi; Yi jin; Yong Zhang; X Shirley Liu; Kevin Struhl
Nucleosome depletion at yeast terminators is not intrinsic and can occur by a transcriptional mechanism linked to 3'-end formation.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(42):17945-50.
2010: Zarmik Moqtaderi; Jie Wang; Debasish Raha; Robert J White; Michael Snyder; Zhiping Weng; Kevin Struhl
Genomic binding profiles of functionally distinct RNA polymerase III transcription complexes in human cells.
Nature structural & molecular biology 2010;17(5):635-40.
2010: Debasish Raha; Zhong Wang; Zarmik Moqtaderi; Linfeng Wu; Guoneng Zhong; Mark Gerstein; Kevin Struhl; Michael Snyder
Close association of RNA polymerase II and many transcription factors with Pol III genes.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(8):3639-44.
2009: Raymond K Auerbach; Ghia Euskirchen; Joel Rozowsky; Nathan Lamarre-Vincent; Zarmik Moqtaderi; Philippe Lefrançois; Kevin Struhl; Mark Gerstein; Michael Snyder
Mapping accessible chromatin regions using Sono-Seq.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(35):14926-31.
2009: Yong Zhang; Zarmik Moqtaderi; Barbara P Rattner; Ghia Euskirchen; Michael Snyder; James T Kadonaga; X Shirley Liu; Kevin Struhl
Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo.
Nature structural & molecular biology 2009;16(8):847-52.
2008: Zarmik Moqtaderi; Kevin Struhl
Expanding the repertoire of plasmids for PCR-mediated epitope tagging in yeast.
Yeast (Chichester, England) 2008;25(4):287-92.
2005: Edward A Sekinger; Zarmik Moqtaderi; Kevin Struhl
Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast.
Molecular cell 2005;18(6):735-48.
2005: Oscar Aparicio; Joseph V Geisberg; Edward A Sekinger; Annie Yang; Zarmik Moqtaderi; Kevin Struhl
Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo.
Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] 2005;Chapter 21():Unit 21.3.
2004: Zarmik Moqtaderi; Kevin Struhl
Defining in vivo targets of nuclear proteins by chromatin immunoprecipitation and microarray analysis.
Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] 2004;Chapter 21():Unit 21.9.
2004: Zarmik Moqtaderi; Kevin Struhl
Genome-wide occupancy profile of the RNA polymerase III machinery in Saccharomyces cerevisiae reveals loci with incomplete transcription complexes.
Molecular and cellular biology 2004;24(10):4118-27.
2004: Juliet L Reid; Zarmik Moqtaderi; Kevin Struhl
Eaf3 regulates the global pattern of histone acetylation in Saccharomyces cerevisiae.
Molecular and cellular biology 2004;24(2):757-64.
2002: Joseph V Geisberg; Zarmik Moqtaderi; Laurent Kuras; Kevin Struhl
Mot1 associates with transcriptionally active promoters and inhibits association of NC2 in Saccharomyces cerevisiae.
Molecular and cellular biology 2002;22(23):8122-34.
2002: Mario Mencía; Zarmik Moqtaderi; Joseph V Geisberg; Laurent Kuras; Kevin Struhl
Activator-specific recruitment of TFIID and regulation of ribosomal protein genes in yeast.
Molecular cell 2002;9(4):823-33.
2000: Laurie A Stargell; Zarmik Moqtaderi; DR Dorris; RC Ogg; Kevin Struhl
TFIIA has activator-dependent and core promoter functions in vivo.
The Journal of biological chemistry 2000;275(17):12374-80.
1998: Zarmik Moqtaderi; M Keaveney; Kevin Struhl
The histone H3-like TAF is broadly required for transcription in yeast.
Molecular cell 1998;2(5):675-82.
1998: Kevin Struhl; Zarmik Moqtaderi
The TAFs in the HAT.
Cell 1998;94(1):1-4.
1998: Kevin Struhl; David Kadosh; M Keaveney; Laurent Kuras; Zarmik Moqtaderi
Activation and repression mechanisms in yeast.
Cold Spring Harbor symposia on quantitative biology 1998;63():413-21.
1996: Zarmik Moqtaderi; J D Yale; Kevin Struhl; Stephen Buratowski
Yeast homologues of higher eukaryotic TFIID subunits.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(25):14654-8.
1996: Zarmik Moqtaderi; Y Bai; D Poon; P Anthony Weil; Kevin Struhl
TBP-associated factors are not generally required for transcriptional activation in yeast.
Nature 1996;383(6596):188-91.