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Gerard Muyzer

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Dimitry Yu Sorokin; Tatjana P Tourova; Gerard Muyzer
Isolation and characterization of two novel alkalitolerant sulfidogens from a Thiopaq bioreactor, Desulfonatronum alkalitolerans sp. nov., and Sulfurospirillum alkalitolerans sp. nov.
Tatjana P Tourova; Boris K Bumazhkin; Tatjana V Kolganova; Gerard Muyzer; Natalia V Slobodova; Dimitry Yu Sorokin
Analysis of community composition of sulfur-oxidizing bacteria in hypersaline and soda lakes using soxB as a functional molecular marker.
Elisabeth W Vissers; Cornelia I Blaga; Paul L E Bodelier; Gerard Muyzer; Christa Schleper; Jaap S Sinninghe Damsté; Maria Tourna; Hendrikus J. Laanbroek
Seasonal and vertical distribution of putative ammonia-oxidizing thaumarchaeotal communities in an oligotrophic lake.

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2013: Dimitry Yu Sorokin; Tatjana P Tourova; Gerard Muyzer
Isolation and characterization of two novel alkalitolerant sulfidogens from a Thiopaq bioreactor, Desulfonatronum alkalitolerans sp. nov., and Sulfurospirillum alkalitolerans sp. nov.
Extremophiles : life under extreme conditions 2013;17(3):535-43.
2013: Tatjana P Tourova; Boris K Bumazhkin; Tatjana V Kolganova; Gerard Muyzer; Natalia V Slobodova; Dimitry Yu Sorokin
Analysis of community composition of sulfur-oxidizing bacteria in hypersaline and soda lakes using soxB as a functional molecular marker.
FEMS microbiology ecology 2013;84(2):280-9.
2013: Elisabeth W Vissers; Cornelia I Blaga; Paul L E Bodelier; Gerard Muyzer; Christa Schleper; Jaap S Sinninghe Damsté; Maria Tourna; Hendrikus J. Laanbroek
Seasonal and vertical distribution of putative ammonia-oxidizing thaumarchaeotal communities in an oligotrophic lake.
FEMS microbiology ecology 2013;83(2):515-26.
2013: Ludovic Besaury; Sylvaine Buquet; Florence Marty; Valérie Mesnage; Gerard Muyzer; Laurent Quillet
Culture-dependent and independent studies of microbial diversity in highly copper-contaminated Chilean marine sediments.
Microbial ecology 2013;65(2):311-24.
2013: Elisabeth W Vissers; Flavio S Anselmetti; Paul L E Bodelier; Gerard Muyzer; Christa Schleper; Maria Tourna; Hendrikus J. Laanbroek
Temporal and spatial coexistence of archaeal and bacterial amoA genes and gene transcripts in Lake Lucerne.
Archaea (Vancouver, B.C.) 2013;2013():289478.
2013: Abdelaziz Belila; Imed Fazaa; Abdennaceur Hassen; Neila Saidi; Mejdi Snoussi; Ben Abbas; Gerard Muyzer
Sulfur bacteria in wastewater stabilization ponds periodically affected by the 'red-water' phenomenon.
Applied microbiology and biotechnology 2013;97(1):379-94.
2012: Stefan Spring; Alfons J M Stams; Roxanne Tapia; Michael Visser; Tanja Woyke; Rizlan Bernier-Latmani; Jan-Fang Cheng; Alex Copeland; John C Detter; Markus Göker; Lynne A Goodwin; Cliff Han; Loren Hauser; Natalia Ivanova; Jan Kuever; Nikos C Kyrpides; Miriam Land; Alla Lapidus; Frank Larimer; Megan Lu; Susan Lucas; Gerard Muyzer; Sofiya N Parshina; Inês A C Pereira; Sam Pitluck; Caroline M Plugge; Manfred Rohde; Peter J Schaap; Hans-Peter Klenk
Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)).
Standards in genomic sciences 2012;7(2):304-19.
2012: Dimitry Y Sorokin; Mark van Loosdrecht; Dana Vejmelkova; Michael Wagner; Jaap S Sinninghe Damsté; Robbert Kleerebezem; Nadezhda A Kostrikina; Denis Le Paslier; Sebastian Lücker; Gerard Muyzer; W Irene C Rijpstra; Holger Daims
Nitrification expanded: discovery, physiology and genomics of a nitrite-oxidizing bacterium from the phylum Chloroflexi.
The ISME journal 2012;6(12):2245-56.
2012: Dimitry Yu Sorokin; Tatjana P Tourova; Anzhela N Panteleeva; Gerard Muyzer
Desulfonatronobacter acidivorans gen. nov., sp. nov. and Desulfobulbus alkaliphilus sp. nov., haloalkaliphilic heterotrophic sulfate-reducing bacteria from soda lakes.
International journal of systematic and evolutionary microbiology 2012;62(Pt 9):2107-13.
2012: Dimitry Yu Sorokin; Anzhela N Panteleeva; Maria S Muntyan; Gerard Muyzer
Thioalkalivibrio sulfidiphilus sp. nov., a haloalkaliphilic, sulfur-oxidizing gammaproteobacterium from alkaline habitats.
International journal of systematic and evolutionary microbiology 2012;62(Pt 8):1884-9.
2012: Dimitry Yu Sorokin; M V Sukhacheva; Tatjana P Tourova; Gerard Muyzer
Desulfuribacillus alkaliarsenatis gen. nov. sp. nov., a deep-lineage, obligately anaerobic, dissimilatory sulfur and arsenate-reducing, haloalkaliphilic representative of the order Bacillales from soda lakes.
Extremophiles : life under extreme conditions 2012;16(4):597-605.
2012: Dimitry Yu Sorokin; M V Suhacheva; Tatjana P Tourova; B Abbas; Gerard Muyzer
Desulfonatronovibrio halophilus sp. nov., a novel moderately halophilic sulfate-reducing bacterium from hypersaline chloride-sulfate lakes in Central Asia.
Extremophiles : life under extreme conditions 2012;16(3):411-7.
2012: João Paulo Bassin; Robbert Kleerebezem; Gerard Muyzer; Alexandre Soares Rosado; Mark van Loosdrecht; Márcia Dezotti
Effect of different salt adaptation strategies on the microbial diversity, activity, and settling of nitrifying sludge in sequencing batch reactors.
Applied microbiology and biotechnology 2012;93(3):1281-94.
2012: Florence Suzanne Louise Marty; Jean-François Ghiglione; Hervé Gueuné; Sandrine Païssé; Laurent Quillet; Mark van Loosdrecht; Gerard Muyzer
Evaluation and optimization of nucleic acid extraction methods for the molecular analysis of bacterial communities associated with corroded carbon steel.
Biofouling 2012;28(4):363-80.
2012: Juanjuan Wang; Sascha Krause; Hendrikus J. Laanbroek; Marion Meima-Franke; Gerard Muyzer; Paul L E Bodelier
Spatial patterns of iron- and methane-oxidizing bacterial communities in an irregularly flooded, riparian wetland.
Frontiers in microbiology 2012;3():64.
2011: Gerard Muyzer; Amrita Pati; Dimitry Y Sorokin; Hui Sun; Tanja Woyke; Patrik D'haeseleer; Brian Foster; Natalia Ivanova; Alla Lapidus; Konstantinos Mavromatis; Nikos C Kyrpides
Complete genome sequence of Thioalkalivibrio sp. K90mix.
Standards in genomic sciences 2011;5(3):341-55.
2011: J P Bassin; Márcia Dezotti; Robbert Kleerebezem; Gerard Muyzer; M Pronk; Mark van Loosdrecht
Effect of elevated salt concentrations on the aerobic granular sludge process: linking microbial activity with microbial community structure.
Applied and environmental microbiology 2011;77(22):7942-53.
2011: Dimitry Yu Sorokin; Tatjana P Tourova; E N Kaparullina; A N Panteleeva; Gerard Muyzer
Natronoflexus pectinivorans gen. nov. sp. nov., an obligately anaerobic and alkaliphilic fermentative member of Bacteroidetes from soda lakes.
Extremophiles : life under extreme conditions 2011;15(6):691-6.
2011: Yang Jiang; Robbert Kleerebezem; Leonie Marang; Gerard Muyzer; Mark van Loosdrecht
Polyhydroxybutyrate production from lactate using a mixed microbial culture.
Biotechnology and bioengineering 2011;108(9):2022-35.
2011: Yang Jiang; Robbert Kleerebezem; Gerard Muyzer; Dimitry Yu Sorokin; Mark van loosdrecht
Plasticicumulans acidivorans gen. nov., sp. nov., a polyhydroxyalkanoate-accumulating gammaproteobacterium from a sequencing-batch bioreactor.
International journal of systematic and evolutionary microbiology 2011;61(Pt 9):2314-9.
2011: Marco de Graaff; Gert-J W Euverink; Ben Abbas; Martijn F M Bijmans; Gerard Muyzer; Albert J H Janssen
Biological treatment of refinery spent caustics under halo-alkaline conditions.
Bioresource technology 2011;102(15):7257-64.
2011: Dimitry Yu Sorokin; Ekaterina N Detkova; Gerard Muyzer
Sulfur-dependent respiration under extremely haloalkaline conditions in soda lake 'acetogens' and the description of Natroniella sulfidigena sp. nov.
FEMS microbiology letters 2011;319(1):88-95.
2011: Dimitry Yu Sorokin; Tatjana P Tourova; Tatjana V Kolganova; Ekaterina N Detkova; Erwin A Galinski; Gerard Muyzer
Culturable diversity of lithotrophic haloalkaliphilic sulfate-reducing bacteria in soda lakes and the description of Desulfonatronum thioautotrophicum sp. nov., Desulfonatronum thiosulfatophilum sp. nov., Desulfonatronovibrio thiodismutans sp. nov., and Desulfonatronovibrio magnus sp. nov.
Extremophiles : life under extreme conditions 2011;15(3):391-401.
2011: Yang Jiang; Leonie Marang; Robbert Kleerebezem; Gerard Muyzer; Mark van Loosdrecht
Effect of temperature and cycle length on microbial competition in PHB-producing sequencing batch reactor.
The ISME journal 2011;5(5):896-907.
2011: Juanjuan Wang; Susann Vollrath; Thilo Behrends; Paul L E Bodelier; Gerard Muyzer; Marion Meima-Franke; Frank Den Oudsten; Philippe Van Cappellen; Hendrikus J. Laanbroek
Distribution and diversity of Gallionella-like neutrophilic iron oxidizers in a tidal freshwater marsh.
Applied and environmental microbiology 2011;77(7):2337-44.
2011: Dimitry Yu Sorokin; J Gijs Kuenen; Gerard Muyzer
The microbial sulfur cycle at extremely haloalkaline conditions of soda lakes.
Frontiers in microbiology 2011;2():44.
2011: Gerard Muyzer; Dimitry Yu Sorokin; Konstantinos Mavromatis; Alla Lapidus; Alicia Clum; Natalia Ivanova; Amrita Pati; Patrick d'Haeseleer; Tanja Woyke; Nikos C Kyrpides
Complete genome sequence of "Thioalkalivibrio sulfidophilus" HL-EbGr7.
Standards in genomic sciences 2011;4(1):23-35.
2011: Olga L Kovaleva; Tatjana P Tourova; Gerard Muyzer; Tatjana V Kolganova; Dimitry Yu Sorokin
Diversity of RuBisCO and ATP citrate lyase genes in soda lake sediments.
FEMS microbiology ecology 2011;75(1):37-47.
2011: Yang Jiang; Marit Hebly; Robbert Kleerebezem; Gerard Muyzer; Mark van Loosdrecht
Metabolic modeling of mixed substrate uptake for polyhydroxyalkanoate (PHA) production.
Water research 2011;45(3):1309-21.
2010: Dimitry Yu Sorokin; II Rusanov; Nikolai V Pimenov; Tatjana P Tourova; Ben Abbas; Gerard Muyzer
Sulfidogenesis under extremely haloalkaline conditions in soda lakes of Kulunda Steppe (Altai, Russia).
FEMS microbiology ecology 2010;73(2):278-90.
2010: Dimitry Yu Sorokin; Gerard Muyzer
Desulfurispira natronophila gen. nov. sp. nov.: an obligately anaerobic dissimilatory sulfur-reducing bacterium from soda lakes.
Extremophiles : life under extreme conditions 2010;14(4):349-55.
2010: Tatjana P Tourova; Olga L Kovaleva; Dimitry Yu Sorokin; Gerard Muyzer
Ribulose-1,5-bisphosphate carboxylase/oxygenase genes as a functional marker for chemolithoautotrophic halophilic sulfur-oxidizing bacteria in hypersaline habitats.
Microbiology (Reading, England) 2010;156(Pt 7):2016-25.
2010: Dimitry Yu Sorokin; Tatjana P Tourova; Olga L Kovaleva; J Gijs Kuenen; Gerard Muyzer
Aerobic carboxydotrophy under extremely haloalkaline conditions in Alkalispirillum/Alkalilimnicola strains isolated from soda lakes.
Microbiology (Reading, England) 2010;156(Pt 3):819-27.
2010: Geert M van der Kraan; Johannes Bruining; Bart P Lomans; Mark van Loosdrecht; Gerard Muyzer
Microbial diversity of an oil-water processing site and its associated oil field: the possible role of microorganisms as information carriers from oil-associated environments.
FEMS microbiology ecology 2010;71(3):428-43.
2010: Dimitry Yu Sorokin; Olga L Kovaleva; Tatjana P Tourova; Gerard Muyzer
Thiohalobacter thiocyanaticus gen. nov., sp. nov., a moderately halophilic, sulfur-oxidizing gammaproteobacterium from hypersaline lakes, that utilizes thiocyanate.
International journal of systematic and evolutionary microbiology 2010;60(Pt 2):444-50.
2010: Dimitry Yu Sorokin; Ekaterina N Detkova; Gerard Muyzer
Propionate and butyrate dependent bacterial sulfate reduction at extremely haloalkaline conditions and description of Desulfobotulus alkaliphilus sp. nov.
Extremophiles : life under extreme conditions 2010;14(1):71-7.
2010: Dimitry Yu Sorokin; Gerard Muyzer
Bacterial dissimilatory MnO(2) reduction at extremely haloalkaline conditions.
Extremophiles : life under extreme conditions 2010;14(1):41-6.
2009: Jeanine S Geelhoed; Dimitry Yu Sorokin; Michael Kühl; Tatjana P Tourova; Horia L Banciu; Gerard Muyzer; Alfons J M Stams; Mark van loosdrecht
Microbial sulfide oxidation in the oxic-anoxic transition zone of freshwater sediment: involvement of lithoautotrophic Magnetospirillum strain J10.
FEMS microbiology ecology 2009;70(1):54-65.
2009: Elisabeth W Vissers; Paul L E Bodelier; Gerard Muyzer; Hendrikus J Laanbroek
A nested PCR approach for improved recovery of archaeal 16S rRNA gene fragments from freshwater samples.
FEMS microbiology letters 2009;298(2):193-8.
2009: Alfons J M Stams; Jacco Huisman; Pedro A Garcia Encina; Gerard Muyzer
Citric acid wastewater as electron donor for biological sulfate reduction.
Applied microbiology and biotechnology 2009;83(5):957-63.
2009: Juanjuan Wang; Gerard Muyzer; Paul L E Bodelier; Hendrikus J. Laanbroek
Diversity of iron oxidizers in wetland soils revealed by novel 16S rRNA primers targeting Gallionella-related bacteria.
The ISME journal 2009;3(6):715-25.
2009: Katja Johnson; Yang Jiang; Robbert Kleerebezem; Gerard Muyzer; Mark van loosdrecht
Enrichment of a mixed bacterial culture with a high polyhydroxyalkanoate storage capacity.
Biomacromolecules 2009;10(4):670-6.
2009: Nora B Sutton; Geert M van der Kraan; Mark van loosdrecht; Gerard Muyzer; Johannes Bruining; Ruud J Schotting
Characterization of geochemical constituents and bacterial populations associated with As mobilization in deep and shallow tube wells in Bangladesh.
Water research 2009;43(6):1720-30.
2009: Bernd H G W van Houten; Roel Meulepas; Wim Van Doesburg; Hauke Smidt; Gerard Muyzer; Alfons J M Stams
Desulfovibrio paquesii sp. nov., a hydrogenotrophic sulfate-reducing bacterium isolated from a synthesis-gas-fed bioreactor treating zinc- and sulfate-rich wastewater.
International journal of systematic and evolutionary microbiology 2009;59(Pt 2):229-33.
2009: Albert J H Janssen; Piet N L Lens; Alfons J M Stams; Caroline M Plugge; Dimitri Y Sorokin; Gerard Muyzer; Henk Dijkman; Erik Van Zessen; Peter Luimes; Cees J N Buisman
Application of bacteria involved in the biological sulfur cycle for paper mill effluent purification.
The Science of the total environment 2009;407(4):1333-43.
2008: Dimitry Yu Sorokin; Tatjana P Tourova; Erwin A Galinski; Gerard Muyzer; J Gijs Kuenen
Thiohalorhabdus denitrificans gen. nov., sp. nov., an extremely halophilic, sulfur-oxidizing, deep-lineage gammaproteobacterium from hypersaline habitats.
International journal of systematic and evolutionary microbiology 2008;58(Pt 12):2890-7.
2008: A Chmura; A A Shapovalova; S van Pelt; Fred van Rantwijk; Tatjana P Tourova; Gerard Muyzer; Dimitry Yu Sorokin
Utilization of arylaliphatic nitriles by haloalkaliphilic Halomonas nitrilicus sp. nov. isolated from soda soils.
Applied microbiology and biotechnology 2008;81(2):371-8.
2008: Margarida F Temudo; Gerard Muyzer; Robbert Kleerebezem; Mark van loosdrecht
Diversity of microbial communities in open mixed culture fermentations: impact of the pH and carbon source.
Applied microbiology and biotechnology 2008;80(6):1121-30.
2008: Dimitry Yu Sorokin; P L F van den Bosch; B Abbas; A J H Janssen; Gerard Muyzer
Microbiological analysis of the population of extremely haloalkaliphilic sulfur-oxidizing bacteria dominating in lab-scale sulfide-removing bioreactors.
Applied microbiology and biotechnology 2008;80(6):965-75.
2008: Wouter van der Star; Andreea I Miclea; Udo G J M van Dongen; Gerard Muyzer; Cristian Picioreanu; Mark van loosdrecht
The membrane bioreactor: a novel tool to grow anammox bacteria as free cells.
Biotechnology and bioengineering 2008;101(2):286-94.
2008: Ann-Charlotte M Toes; Niko Finke; J Gijs Kuenen; Gerard Muyzer
Effects of deposition of heavy-metal-polluted harbor mud on microbial diversity and metal resistance in sandy marine sediments.
Archives of environmental contamination and toxicology 2008;55(3):372-85.
2008: Ann-Charlotte M Toes; Maria H Daleke; J Gijs Kuenen; Gerard Muyzer
Expression of copA and cusA in Shewanella during copper stress.
Microbiology (Reading, England) 2008;154(Pt 9):2709-18.
2008: A A Shapovalova; T V Khijniak; Tatjana P Tourova; Gerard Muyzer; Dimitry Yu Sorokin
Heterotrophic denitrification at extremely high salt and pH by haloalkaliphilic Gammaproteobacteria from hypersaline soda lakes.
Extremophiles : life under extreme conditions 2008;12(5):619-25.
2008: Dimitry Yu Sorokin; Tatjana P Tourova; Gerard Muyzer; Gijs J Kuenen
Thiohalospira halophila gen. nov., sp. nov. and Thiohalospira alkaliphila sp. nov., novel obligately chemolithoautotrophic, halophilic, sulfur-oxidizing gammaproteobacteria from hypersaline habitats.
International journal of systematic and evolutionary microbiology 2008;58(Pt 7):1685-92.
2008: Gerard Muyzer; Alfons J M Stams
The ecology and biotechnology of sulphate-reducing bacteria.
Nature reviews. Microbiology 2008;6(6):441-54.
2008: Dimitry Yu Sorokin; Tatjana P Tourova; Anne M Henstra; Alfons J M Stams; Erwin A Galinski; Gerard Muyzer
Sulfidogenesis under extremely haloalkaline conditions by Desulfonatronospira thiodismutans gen. nov., sp. nov., and Desulfonatronospira delicata sp. nov. - a novel lineage of Deltaproteobacteria from hypersaline soda lakes.
Microbiology (Reading, England) 2008;154(Pt 5):1444-53.
2008: Emel Sahan; Gerard Muyzer
Diversity and spatio-temporal distribution of ammonia-oxidizing Archaea and Bacteria in sediments of the Westerschelde estuary.
FEMS microbiology ecology 2008;64(2):175-86.
2008: Dimitry Yu Sorokin; Tatjana P Tourova; Marc Mussmann; Gerard Muyzer
Dethiobacter alkaliphilus gen. nov. sp. nov., and Desulfurivibrio alkaliphilus gen. nov. sp. nov.: two novel representatives of reductive sulfur cycle from soda lakes.
Extremophiles : life under extreme conditions 2008;12(3):431-9.
2008: Horia L Banciu; Dimitry Y Sorokin; Tatjana P Tourova; Erwin A Galinski; Maria S Muntyan; J Gijs Kuenen; Gerard Muyzer
Influence of salts and pH on growth and activity of a novel facultatively alkaliphilic, extremely salt-tolerant, obligately chemolithoautotrophic sufur-oxidizing Gammaproteobacterium Thioalkalibacter halophilus gen. nov., sp. nov. from South-Western Siberian soda lakes.
Extremophiles : life under extreme conditions 2008;12(3):391-404.
2008: Gerard Muyzer; Geert M van der Kraan
Bacteria from hydrocarbon seep areas growing on short-chain alkanes.
Trends in microbiology 2008;16(4):138-41.
2008: Shabir A Dar; Robbert Kleerebezem; Alfons J M Stams; J Gijs Kuenen; Gerard Muyzer
Competition and coexistence of sulfate-reducing bacteria, acetogens and methanogens in a lab-scale anaerobic bioreactor as affected by changing substrate to sulfate ratio.
Applied microbiology and biotechnology 2008;78(6):1045-55.
2008: Guus Roeselers; Eline H Huisjes; Mark van loosdrecht; Gerard Muyzer
Diversity and expression of cyanobacterial hupS genes in pure cultures and in a nitrogen-limited phototrophic biofilm.
FEMS microbiology ecology 2008;63(3):292-300.
2008: Mirjam J Foti; Dimitry Yu Sorokin; Elena E Zacharova; Nicolai V Pimenov; J Gijs Kuenen; Gerard Muyzer
Bacterial diversity and activity along a salinity gradient in soda lakes of the Kulunda Steppe (Altai, Russia).
Extremophiles : life under extreme conditions 2008;12(1):133-45.
2007: Dimitry Yu Sorokin; Yuri A Trotsenko; Nina V Doronina; Tatjana P Tourova; Erwin A Galinski; Tatjana V Kolganova; Gerard Muyzer
Methylohalomonas lacus gen. nov., sp. nov. and Methylonatrum kenyense gen. nov., sp. nov., methylotrophic gammaproteobacteria from hypersaline lakes.
International journal of systematic and evolutionary microbiology 2007;57(Pt 12):2762-9.
2007: Guus Roeselers; Mark van loosdrecht; Gerard Muyzer
Heterotrophic pioneers facilitate phototrophic biofilm development.
Microbial ecology 2007;54(3):578-85.
2007: Guus Roeselers; Lucas J Stal; Mark van loosdrecht; Gerard Muyzer
Development of a PCR for the detection and identification of cyanobacterial nifD genes.
Journal of microbiological methods 2007;70(3):550-6.
2007: Dimitry Yu Sorokin; Sander van Pelt; Tatjana P Tourova; Gerard Muyzer
Microbial isobutyronitrile utilization under haloalkaline conditions.
Applied and environmental microbiology 2007;73(17):5574-9.
2007: Dimitry Yu Sorokin; Tatjana P Tourova; Gesche Braker; Gerard Muyzer
Thiohalomonas denitrificans gen. nov., sp. nov. and Thiohalomonas nitratireducens sp. nov., novel obligately chemolithoautotrophic, moderately halophilic, thiodenitrifying Gammaproteobacteria from hypersaline habitats.
International journal of systematic and evolutionary microbiology 2007;57(Pt 7):1582-9.
2007: Shabir A Dar; Alfons J M Stams; J Gijs Kuenen; Gerard Muyzer
Co-existence of physiologically similar sulfate-reducing bacteria in a full-scale sulfidogenic bioreactor fed with a single organic electron donor.
Applied microbiology and biotechnology 2007;75(6):1463-72.
2007: M Claire Horner-Devine; Jessica M Silver; Mathew A Leibold; Brendan J M Bohannan; Robert K Colwell; Jed A Fuhrman; Jessica L Green; Cheryl R Kuske; Jennifer B H Martiny; Gerard Muyzer; Lise Ovreås; Anna-Louise Reysenbach; Val H Smith
A comparison of taxon co-occurrence patterns for macro- and microorganisms.
Ecology 2007;88(6):1345-53.
2007: Dimitry Yu Sorokin; Tatjana P Tourova; Ekatherina Y Bezsoudnova; Arjan Pol; Gerard Muyzer
Denitrification in a binary culture and thiocyanate metabolism in Thiohalophilus thiocyanoxidans gen. nov. sp. nov. - a moderately halophilic chemolithoautotrophic sulfur-oxidizing Gammaproteobacterium from hypersaline lakes.
Archives of microbiology 2007;187(6):441-50.
2007: Dimitry Yu Sorokin; Sander van Pelt; Tatjana P Tourova; Shinichi Takaichi; Gerard Muyzer
Acetonitrile degradation under haloalkaline conditions by Natronocella acetinitrilica gen. nov., sp. nov.
Microbiology (Reading, England) 2007;153(Pt 4):1157-64.
2007: Mirjam Foti; Dimitry Yu Sorokin; Bart Lomans; Marc Mussman; Elena E Zacharova; Nikolay V Pimenov; J Gijs Kuenen; Gerard Muyzer
Diversity, activity, and abundance of sulfate-reducing bacteria in saline and hypersaline soda lakes.
Applied and environmental microbiology 2007;73(7):2093-100.
2007: Dimitry Yu Sorokin; M Foti; B J Tindall; Gerard Muyzer
Desulfurispirillum alkaliphilum gen. nov. sp. nov., a novel obligately anaerobic sulfur- and dissimilatory nitrate-reducing bacterium from a full-scale sulfide-removing bioreactor.
Extremophiles : life under extreme conditions 2007;11(2):363-70.
2007: Guus Roeselers; Tracy B Norris; Richard W Castenholz; Søren Rysgaard; Ronnie N Glud; Michael Kühl; Gerard Muyzer
Diversity of phototrophic bacteria in microbial mats from Arctic hot springs (Greenland).
Environmental microbiology 2007;9(1):26-38.
2007: Dimitry Yu Sorokin; Mirjam Foti; Holly C Pinkart; Gerard Muyzer
Sulfur-oxidizing bacteria in Soap Lake (Washington State), a meromictic, haloalkaline lake with an unprecedented high sulfide content.
Applied and environmental microbiology 2007;73(2):451-5.
2007: Shabir A Dar; Li Yao; Udo van Dongen; J Gijs Kuenen; Gerard Muyzer
Analysis of diversity and activity of sulfate-reducing bacterial communities in sulfidogenic bioreactors using 16S rRNA and dsrB genes as molecular markers.
Applied and environmental microbiology 2007;73(2):594-604.
2006: Guillermina Hernandez-Raquet; Hélène Budzinski; Pierre Caumette; Patrick Dabert; Karyn Le Ménach; Gerard Muyzer; Robert Duran
Molecular diversity studies of bacterial communities of oil polluted microbial mats from the Etang de Berre (France).
FEMS microbiology ecology 2006;58(3):550-62.
2006: Rajkumari Kumaraswamy; J Gijs Kuenen; Robbert Kleerebezem; Mark van loosdrecht; Gerard Muyzer
Structure of microbial communities performing the simultaneous reduction of Fe(II)EDTA.NO2- and Fe(III)EDTA -.
Applied microbiology and biotechnology 2006;73(4):922-31.
2006: Guus Roeselers; Barbara Zippel; Marc Staal; Mark van loosdrecht; Gerard Muyzer
On the reproducibility of microcosm experiments - different community composition in parallel phototrophic biofilm microcosms.
FEMS microbiology ecology 2006;58(2):169-78.
2006: Dimitry Yu Sorokin; Tatjana P Tourova; Tatjana V Kolganova; Elizaveta M Spiridonova; Ivan A Berg; Gerard Muyzer
Thiomicrospira halophila sp. nov., a moderately halophilic, obligately chemolithoautotrophic, sulfur-oxidizing bacterium from hypersaline lakes.
International journal of systematic and evolutionary microbiology 2006;56(Pt 10):2375-80.
2006: Dimitry Yu Sorokin; Tatjana P Tourova; Anatoly M Lysenko; Gerard Muyzer
Diversity of culturable halophilic sulfur-oxidizing bacteria in hypersaline habitats.
Microbiology (Reading, England) 2006;152(Pt 10):3013-23.
2006: Katja Metfies; MARCO BERZANO; Claudio Gualerzi; Gerard Muyzer; Linda K Medlin
Meeting report: molecular ecology workshop. Detection of microbial biodiversity in environmental samples, Camerino, Italy, September 19-21, 2005.
Protist 2006;157(3):247-50.
2006: Rajkumari Kumaraswamy; Klaas Sjollema; Gijs J Kuenen; Mark van loosdrecht; Gerard Muyzer
Nitrate-dependent [Fe(II)EDTA]2- oxidation by Paracoccus ferrooxidans sp. nov., isolated from a denitrifying bioreactor.
Systematic and applied microbiology 2006;29(4):276-86.
2006: Dominic Frigon; Gerard Muyzer; Mark van loosdrecht; Lutgarde Raskin
rRNA and poly-beta-hydroxybutyrate dynamics in bioreactors subjected to feast and famine cycles.
Applied and environmental microbiology 2006;72(4):2322-30.
2006: Mirjam Foti; Shengbin Ma; Dimitry Yu Sorokin; Jan Rademaker; J Gijs Kuenen; Gerard Muyzer
Genetic diversity and biogeography of haloalkaliphilic sulphur-oxidizing bacteria belonging to the genus Thioalkalivibrio.
FEMS microbiology ecology 2006;56(1):95-101.
2006: Bruce Rittman; Martina Hausner; Frank E Loeffler; Nancy G Love; Gerard Muyzer; Satoshi Okabe; Daniel B Oerther; Jordan Peccia; Lutgarde Raskin; Michael Wagner
A vista for microbial ecology and environmental biotechnology.
Environmental science & technology 2006;40(4):1096-103.
2005: Gerard Muyzer; Esengül Yildirim; Udo van Dongen; Michael Kühl; Roland Thar
Identification of "Candidatus Thioturbo danicus," a microaerophilic bacterium that builds conspicuous veils on sulfidic sediments.
Applied and environmental microbiology 2005;71(12):8929-33.
2005: Dimitry Yu Sorokin; Tatjana P Tourova; Gerard Muyzer
Oxidation of thiosulfate to tetrathionate by an haloarchaeon isolated from hypersaline habitat.
Extremophiles : life under extreme conditions 2005;9(6):501-4.
2005: Dimitry Yu Sorokin; Tatjana P Tourova; Gerard Muyzer
Citreicella thiooxidans gen. nov., sp. nov., a novel lithoheterotrophic sulfur-oxidizing bacterium from the Black Sea.
Systematic and applied microbiology 2005;28(8):679-87.
2005: Rajkumari Kumaraswamy; Udo van Dongen; J Gijs Kuenen; Wiebe Abma; Mark van loosdrecht; Gerard Muyzer
Characterization of microbial communities removing nitrogen oxides from flue gas: the BioDeNOx process.
Applied and environmental microbiology 2005;71(10):6345-52.
2005: Maira Martínez-Alonso; Judith van Bleijswijk; Núria Gaju; Gerard Muyzer
Diversity of anoxygenic phototrophic sulfur bacteria in the microbial mats of the Ebro Delta: a combined morphological and molecular approach.
FEMS microbiology ecology 2005;52(3):339-50.
2005: Dimitry Yu Sorokin; Tatjana P Tourova; Elizaveta M Spiridonova; Fred Rainey; Gerard Muyzer
Thioclava pacifica gen. nov., sp. nov., a novel facultatively autotrophic, marine, sulfur-oxidizing bacterium from a near-shore sulfidic hydrothermal area.
International journal of systematic and evolutionary microbiology 2005;55(Pt 3):1069-75.
2005: Shabir A Dar; J Gijs Kuenen; Gerard Muyzer
Nested PCR-denaturing gradient gel electrophoresis approach to determine the diversity of sulfate-reducing bacteria in complex microbial communities.
Applied and environmental microbiology 2005;71(5):2325-30.
2005: Henk M Jonkers; I-O Koh; P Behrend; Gerard Muyzer; Dirk de Beer
Aerobic organic carbon mineralization by sulfate-reducing bacteria in the oxygen-saturated photic zone of a hypersaline microbial mat.
Microbial ecology 2005;49(2):291-300.
2005: Horia Banciu; Dimitry Yu Sorokin; W Irene C Rijpstra; Jaap S Sinninghe Damsté; Erwin A Galinski; Shinichi Takaichi; Gerard Muyzer; J Gijs Kuenen
Fatty acid, compatible solute and pigment composition of obligately chemolithoautotrophic alkaliphilic sulfur-oxidizing bacteria from soda lakes.
FEMS microbiology letters 2005;243(1):181-7.
2004: aude fourçans; Tirso García De Oteyza; Andrea Wieland; Antoni Solé; Elia Diestra; Judith van Bleijswijk; Joan O Grimalt; Michael Kühl; Isabel Esteve; Gerard Muyzer; Pierre Caumette; Robert Duran
Characterization of functional bacterial groups in a hypersaline microbial mat community (Salins-de-Giraud, Camargue, France).
FEMS microbiology ecology 2004;51(1):55-70.
2004: Horia Banciu; Dimitry Yu Sorokin; Erwin A Galinski; Gerard Muyzer; Robbert Kleerebezem; J Gijs Kuenen
Thialkalivibrio halophilus sp. nov., a novel obligately chemolithoautotrophic, facultatively alkaliphilic, and extremely salt-tolerant, sulfur-oxidizing bacterium from a hypersaline alkaline lake.
Extremophiles : life under extreme conditions 2004;8(4):325-34.
2004: Dimitry Yu Sorokin; Tatjana P Tourova; Alexey N Antipov; Gerard Muyzer; J Gijs Kuenen
Anaerobic growth of the haloalkaliphilic denitrifying sulfur-oxidizing bacterium Thialkalivibrio thiocyanodenitrificans sp. nov. with thiocyanate.
Microbiology (Reading, England) 2004;150(Pt 7):2435-42.
2004: Horia Banciu; Dimitry Yu Sorokin; Robbert Kleerebezem; Gerard Muyzer; Erwin A Galinski; J Gijs Kuenen
Growth kinetics of haloalkaliphilic, sulfur-oxidizing bacterium Thioalkalivibrio versutus strain ALJ 15 in continuous culture.
Extremophiles : life under extreme conditions 2004;8(3):185-92.
2004: Jaap S Sinninghe Damsté; Gerard Muyzer; Ben Abbas; Sebastiaan W Rampen; Guillaume Massé; W Guy Allard; Simon T Belt; Jean-Michel Robert; Steven J Rowland; J Michael Moldowan; Silvana M Barbanti; Frederick J Fago; Peter Denisevich; Jeremy Dahl; Luiz A F Trindade; Stefan Schouten
The rise of the rhizosolenid diatoms.
Science (New York, N.Y.) 2004;304(5670):584-7.
2004: Rajkumari Kumaraswamy; Gerard Muyzer; J Gijs Kuenen; M C M Loosdrecht
Biological removal of NOx from flue gas.
Water science and technology : a journal of the International Association on Water Pollution Research 2004;50(6):9-15.
2003: Henk M Jonkers; Rebecca Ludwig; Rutger Wit; Michael Kühl; Gerard Muyzer; Helge Niemann; Niko Finke; Dirk Beer
Structural and functional analysis of a microbial mat ecosystem from a unique permanent hypersaline inland lake: 'La Salada de Chiprana' (NE Spain).
FEMS microbiology ecology 2003;44(2):175-89.
2002: Hendrik Schäfer; Ben Abbas; Harry Witte; Gerard Muyzer
Genetic diversity of 'satellite' bacteria present in cultures of marine diatoms.
FEMS microbiology ecology 2002;42(1):25-35.
2002: Emilio O Casamayor; Carlos Pedrós-Alió; Gerard Muyzer; Rudolf Amann
Microheterogeneity in 16S ribosomal DNA-defined bacterial populations from a stratified planktonic environment is related to temporal changes and to ecological adaptations.
Applied and environmental microbiology 2002;68(4):1706-14.
2000: Andreas Teske; Thorsten Brinkhoff; Gerard Muyzer; Duane P Moser; J Rethmeier; Holger W Jannasch
Diversity of thiosulfate-oxidizing bacteria from marine sediments and hydrothermal vents.
Applied and environmental microbiology 2000;66(8):3125-33.
2000: SM Sievert; Jan Kuever; Gerard Muyzer
Identification of 16S ribosomal DNA-defined bacterial populations at a shallow submarine hydrothermal vent near Milos Island (Greece).
Applied and environmental microbiology 2000;66(7):3102-9.
2000: Ulrich Nübel; Ferran Garcia-Pichel; Gerard Muyzer
The halotolerance and phylogeny of cyanobacteria with tightly coiled trichomes (Spirulina Turpin) and the description of Halospirulina tapeticola gen. nov., sp. nov.
International journal of systematic and evolutionary microbiology 2000;50 Pt 3():1265-77.
2000: Ulrich Nübel; Ferran Garcia-Pichel; E Clavero; Gerard Muyzer
Matching molecular diversity and ecophysiology of benthic cyanobacteria and diatoms in communities along a salinity gradient.
Environmental microbiology 2000;2(2):217-26.
2000: Emilio O Casamayor; H Schäfer; L Bañeras; Carlos Pedrós-Alió; Gerard Muyzer
Identification of and spatio-temporal differences between microbial assemblages from two neighboring sulfurous lakes: comparison by microscopy and denaturing gradient gel electrophoresis.
Applied and environmental microbiology 2000;66(2):499-508.
1999: Cecilia M Santegoeds; L R Damgaard; G Hesselink; J Zopfi; P Lens; Gerard Muyzer; Dirk de Beer
Distribution of sulfate-reducing and methanogenic bacteria in anaerobic aggregates determined by microsensor and molecular analyses.
Applied and environmental microbiology 1999;65(10):4618-29.
1999: Thorsten Brinkhoff; SM Sievert; Jan Kuever; Gerard Muyzer
Distribution and diversity of sulfur-oxidizing Thiomicrospira spp. at a shallow-water hydrothermal vent in the Aegean Sea (Milos, Greece).
Applied and environmental microbiology 1999;65(9):3843-9.
1999: SM Sievert; Thorsten Brinkhoff; Gerard Muyzer; W Ziebis; Jan Kuever
Spatial heterogeneity of bacterial populations along an environmental gradient at a shallow submarine hydrothermal vent near Milos Island (Greece).
Applied and environmental microbiology 1999;65(9):3834-42.
1999: Marc Strous; John A Fuerst; E H Kramer; S Logemann; Gerard Muyzer; Katinka van de Pas-Schoonen; R Webb; J Gijs Kuenen; Mike S.M. Jetten
Missing lithotroph identified as new planctomycete.
Nature 1999;400(6743):446-9.
1999: Thorsten Brinkhoff; Gerard Muyzer; C O Wirsen; Jan Kuever
Thiomicrospira chilensis sp. nov., a mesophilic obligately chemolithoautotrophic sulfuroxidizing bacterium isolated from a Thioploca mat.
International journal of systematic bacteriology 1999;49 Pt 2():875-9.
1999: Thorsten Brinkhoff; Gerard Muyzer; C O Wirsen; Jan Kuever
Thiomicrospira kuenenii sp. nov. and Thiomicrospira frisia sp. nov., two mesophilic obligately chemolithoautotrophic sulfur-oxidizing bacteria isolated from an intertidal mud flat.
International journal of systematic bacteriology 1999;49 Pt 2():385-92.
1999: Ulrich Nübel; Ferran Garcia-Pichel; Michael Kühl; Gerard Muyzer
Quantifying microbial diversity: morphotypes, 16S rRNA genes, and carotenoids of oxygenic phototrophs in microbial mats.
Applied and environmental microbiology 1999;65(2):422-30.
1998: Mike S.M. Jetten; Marc Strous; Katinka van de Pas-Schoonen; Jos Schalk; Udo van Dongen; A A van de Graaf; S Logemann; Gerard Muyzer; Mark van loosdrecht; J Gijs Kuenen
The anaerobic oxidation of ammonium.
FEMS microbiology reviews 1998;22(5):421-37.
1998: Antje Wichels; Stefan S Biel; Hans R Gelderblom; Thorsten Brinkhoff; Gerard Muyzer; C Schütt
Bacteriophage diversity in the North Sea.
Applied and environmental microbiology 1998;64(11):4128-33.
1998: Dimitry Yu Sorokin; Gerard Muyzer; Thorsten Brinkhoff; J Gijs Kuenen; Mike S.M. Jetten
Isolation and characterization of a novel facultatively alkaliphilic Nitrobacter species, N. alkalicus sp. nov.
Archives of microbiology 1998;170(5):345-52.
1998: Ferran Garcia-Pichel; Ulrich Nübel; Gerard Muyzer
The phylogeny of unicellular, extremely halotolerant cyanobacteria.
Archives of microbiology 1998;169(6):469-82.
1998: Gerard Muyzer; K Smalla
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology.
Antonie van Leeuwenhoek 1998;73(1):127-41.
1997: C Wawer; Mike S.M. Jetten; Gerard Muyzer
Genetic diversity and expression of the [NiFe] hydrogenase large-subunit gene of Desulfovibrio spp. in environmental samples.
Applied and environmental microbiology 1997;63(11):4360-9.
1997: Thorsten Brinkhoff; Gerard Muyzer
Increased species diversity and extended habitat range of sulfur-oxidizing Thiomicrospira spp.
Applied and environmental microbiology 1997;63(10):3789-96.
1997: Ulrich Nübel; Ferran Garcia-Pichel; Gerard Muyzer
PCR primers to amplify 16S rRNA genes from cyanobacteria.
Applied and environmental microbiology 1997;63(8):3327-32.
1997: Mike S.M. Jetten; S Logemann; Gerard Muyzer; Lesley A Robertson; Simon de Vries; Mark van loosdrecht; J Gijs Kuenen
Novel principles in the microbial conversion of nitrogen compounds.
Antonie van Leeuwenhoek 1997;71(1-2):75-93.
1996: Andreas Teske; P Sigalevich; Y Cohen; Gerard Muyzer
Molecular identification of bacteria from a coculture by denaturing gradient gel electrophoresis of 16S ribosomal DNA fragments as a tool for isolation in pure cultures.
Applied and environmental microbiology 1996;62(11):4210-5.
1996: Ferran Garcia-Pichel; L Prufert-Bebout; Gerard Muyzer
Phenotypic and phylogenetic analyses show Microcoleus chthonoplastes to be a cosmopolitan cyanobacterium.
Applied and environmental microbiology 1996;62(9):3284-91.
1996: S Rölleke; Gerard Muyzer; C Wawer; G Wanner; Werner Lubitz
Identification of bacteria in a biodegraded wall painting by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA.
Applied and environmental microbiology 1996;62(6):2059-65.
1996: Andreas Teske; C Wawer; Gerard Muyzer; N B Ramsing
Distribution of sulfate-reducing bacteria in a stratified fjord (Mariager Fjord, Denmark) as evaluated by most-probable-number counts and denaturing gradient gel electrophoresis of PCR-amplified ribosomal DNA fragments.
Applied and environmental microbiology 1996;62(4):1405-15.
1995: C Wawer; H Rüggeberg; G Meyer; Gerard Muyzer
A simple and rapid electrophoresis method to detect sequence variation in PCR-amplified DNA fragments.
Nucleic acids research 1995;23(23):4928-9.
1995: Gerard Muyzer; Andreas Teske; C O Wirsen; H W Jannasch
Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments.
Archives of microbiology 1995;164(3):165-72.
1995: C Wawer; Gerard Muyzer
Genetic diversity of Desulfovibrio spp. in environmental samples analyzed by denaturing gradient gel electrophoresis of [NiFe] hydrogenase gene fragments.
Applied and environmental microbiology 1995;61(6):2203-10.
1987: Gerard Muyzer; A C de Bruyn; D J Schmedding; P Bos; Peter Westbroek; Gijs J Kuenen
A Combined Immunofluorescence-DNA-Fluorescence Staining Technique for Enumeration of Thiobacillus ferrooxidans in a Population of Acidophilic Bacteria.
Applied and environmental microbiology 1987;53(4):660-4.